RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 HIST1H3AP68431 136 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 ENDOGQ14249 297 aaKnown RBP10.41□□□□□ -0.74
SMAD3-202ENST00000439724 PLA1AQ53H76 456 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 HIST2H3PS2Q5TEC6 136 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 RSBN1Q5VWQ0 802 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-202ENST00000439724 HIST2H3AQ71DI3 136 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 IZUMO1Q8IYV9 350 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 TOMM5Q8N4H5 51 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 NKAIN3Q8N8D7 197 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 CLEC1AQ8NC01 280 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 OR10D3Q8NH80 312 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 NABP1Q96AH0 204 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 ZNF416Q9BWM5 594 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 ZNF275Q9NSD4 429 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-202ENST00000439724 CDV3Q9UKY7 258 aaKnown RBP10.41□□□□□ -0.74
SMAD3-202ENST00000439724 VCANP13611 3396 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 A0A0B4J293 547 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 LOC100289279A0A1B0GTE1 492 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 LOC390937A0A1W2PQ73 354 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 HMX3A6NHT5 357 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 CDRT15L2A8MXV6 281 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 RER1O15258 196 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 CDK2P24941 298 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 BTCP35070 178 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 POU3F4P49335 361 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 STARP49675 285 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 ZNF84P51523 738 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 CLDN15P56746 228 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 MRPS34P82930 218 aaKnown RBP10.4□□□□□ -0.74
SMAD3-202ENST00000439724 DYRK1AQ13627 763 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 KLF9Q13886 244 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-202ENST00000439724 TAF13Q15543 124 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 SGCAQ16586 387 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 C1orf100Q5SVJ3 147 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 TMEM69Q5SWH9 247 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 LINGO2Q7L985 606 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 SIAH3Q8IW03 269 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 OR6M1Q8NGM8 313 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 CPNE4Q96A23 557 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-202ENST00000439724 SLC25A28Q96A46 364 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 CREB3L1Q96BA8 519 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 FAM3DQ96BQ1 224 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 UPRTQ96BW1 309 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 ULBP2Q9BZM5 246 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 AUNIPQ9H7T9 357 aa10.4□□□□□ -0.74
SMAD3-202ENST00000439724 A0A1B0GTI1 187 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 A0A1B0GVI7 797 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 CENPXA8MT69 81 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 SYT7O43581 403 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 ORC5O43913 435 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 DOK2O60496 412 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 CYTIPO60759 359 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 KRT33AO76009 404 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 GLSO94925 669 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 CCL1P22362 96 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 HTR2CP28335 458 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 DDOSTP39656 456 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 SRP9P49458 86 aaKnown RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 CAPZA1P52907 286 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 ZNF121P58317 390 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 TAS2R20P59543 309 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 BTG1P62324 171 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 RNASE12Q5GAN4 147 aaKnown RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 ANKRD16Q6P6B7 361 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 DNM1P46Q6ZS02 220 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 KRT74Q7RTS7 529 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 PRSS45Q7RTY3 260 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 LYPD6Q86Y78 171 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 SERPINA12Q8IW75 414 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 SULF2Q8IWU5 870 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 PLPP7Q8NBV4 271 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 MDS2Q8NDY4 140 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 GJC3Q8NFK1 279 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 OR51D1Q8NGF3 324 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 OR51A2Q8NGJ7 313 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 OR6F1Q8NGZ6 308 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 FOXRED1Q96CU9 486 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 KLF13Q9Y2Y9 288 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 RBMX2Q9Y388 322 aaKnown RBP10.39□□□□□ -0.75
SMAD3-202ENST00000439724 CACNA1HO95180 2353 aa10.39□□□□□ -0.75
SMAD3-202ENST00000439724 OTOGLQ3ZCN5 2332 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 SPAARA0A1B0GVQ0 90 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 OR5H15A6NDH6 313 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 ACOT7O00154 380 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 XRCC3O43542 346 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 NME2P1O60361 137 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 LMX1BO60663 402 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 CTAG2O75638 210 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 CCNKO75909 580 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 ECDO95905 644 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-202ENST00000439724 NME2P22392 152 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 GDNFP39905 211 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 CX3CR1P49238 355 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 PRKXP51817 358 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 SOX8P57073 446 aa10.38□□□□□ -0.75
SMAD3-202ENST00000439724 TATDN3Q17R31 274 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms