RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CD300LFQ8TDQ1 290 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 GCDHQ92947 438 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 VRK1Q99986 396 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 SLIRPQ9GZT3 109 aaKnown RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 LHX9Q9NQ69 397 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 TIMM10BQ9Y5J6 103 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 PMP2P02689 132 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 OR8U9P0C7N5 309 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 NAGAP17050 411 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 SORDQ00796 357 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 IL10RAQ13651 578 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 DOC2BQ14184 412 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 RBM39Q14498 530 aaKnown RBP11.08□□□□□ -0.63
TCOF1-205ENST00000439160 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 OR5AS1Q8N127 324 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 GTPBP8Q8N3Z3 284 aaPredicted RBP11.08□□□□□ -0.63
TCOF1-205ENST00000439160 PTPMT1Q8WUK0 201 aaPredicted RBP11.08□□□□□ -0.63
TCOF1-205ENST00000439160 SNX18Q96RF0 628 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 SEC22CQ9BRL7 303 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 JAM3Q9BX67 310 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 R4GMQ9 66 aa11.08□□□□□ -0.63
TCOF1-205ENST00000439160 ACACAQ13085 2346 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 SBF1O95248 1867 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 A0A087WZY1 265 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 TOX3O15405 576 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-205ENST00000439160 FABP7O15540 132 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 CT45A8P0DMV1 189 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 CT45A9P0DMV2 189 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 TAS2R20P59543 309 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 PRSS53Q2L4Q9 553 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 CT45A2Q5DJT8 189 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 AADACL4Q5VUY2 407 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 RTL6Q6ICC9 239 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 KANSL1Q7Z3B3 1105 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 OTOSQ8NHW6 89 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 NKX3-1Q99801 234 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-205ENST00000439160 TNFSF4P23510 183 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 RGS19P49795 217 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 FUT7Q11130 342 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 VASH2Q86V25 355 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 AIFM2Q9BRQ8 373 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 PBOV1Q9GZY1 135 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 DYNLRB1Q9NP97 96 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 TRAPPC2LQ9UL33 140 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 DICER1Q9UPY3 1922 aaKnown RBP11.08□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF705EA8MWA4 302 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-205ENST00000439160 GABARAPH6UMI1 98 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 MAGEB1P43366 347 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 OR1C1Q15619 314 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 DGAT2L6Q6ZPD8 337 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF546Q86UE3 836 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 IER2Q9BTL4 223 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 B3GNT2Q9NY97 397 aa11.08□□□□□ -0.64
TCOF1-205ENST00000439160 IGHV5-10-1A0A0J9YXX1 117 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 A0A1B0GTH9 108 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 RRP8O43159 456 aaKnown RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 NXPH2O95156 264 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 BAK1Q16611 211 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 FAAP20Q6NZ36 180 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 TEX19Q8NA77 164 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 OR1S1Q8NH92 325 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 OR2V1Q8NHB1 315 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SECTM1Q8WVN6 248 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 KCNE4Q8WWG9 221 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 OR8B4Q96RC9 309 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SPIN2AQ99865 258 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SPIN2BQ9BPZ2 258 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SMIM3Q9BZL3 60 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 NBASA2RRP1 2371 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 C5orf49A4QMS7 147 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SULT1B1O43704 296 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ZFPL1O95159 310 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 GRPP07492 148 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 EPXP11678 715 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 LTBRP36941 435 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 RAP2BP61225 183 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 FZD5Q13467 585 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 C2orf76Q3KRA6 126 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 B3GNTL1Q67FW5 361 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 NAXDQ8IW45 347 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 OR1J2Q8NGS2 313 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 AKR7LQ8NHP1 331 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 GLYATL2Q8WU03 294 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 TRIB1Q96RU8 372 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 GPA33Q99795 319 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 TTC28Q96AY4 2481 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 PRICKLE3O43900 615 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 PCMT1P22061 227 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 NPY4RP50391 375 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SLC16A12Q6ZSM3 486 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 RASL10BQ96S79 203 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ZCCHC4Q9H5U6 513 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 LUZP4Q9P127 313 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms