RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TMEM86AQ8N2M4 240 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 LIX1Q8N485 282 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PDCL2Q8N4E4 241 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF557Q8N988 423 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 C20orf203Q8NBC4 194 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 OR4K14Q8NGD5 310 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 OR10G6Q8NH81 332 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 FANK1Q8TC84 345 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PHF10Q8WUB8 498 aaKnown RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCDC12Q8WUD4 166 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PIGCQ92535 297 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 RDH5Q92781 318 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 TRIM44Q96DX7 344 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 TMEM101Q96IK0 257 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF670Q9BS34 389 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 TUBGCP2Q9BSJ2 902 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 RBKSQ9H477 322 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZDHHC11Q9H8X9 412 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 GORASP2Q9H8Y8 452 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 NANOGQ9H9S0 305 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 SH2D2AQ9NP31 389 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 POLE4Q9NR33 117 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 UFSP2Q9NUQ7 469 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 NUDT15Q9NV35 164 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PIPOXQ9P0Z9 390 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 KIF25Q9UIL4 384 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PRPF19Q9UMS4 504 aaKnown RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 COPS3Q9UNS2 423 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 RASD1Q9Y272 281 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 VPS13CQ709C8 3753 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 MAP1AP78559 2803 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 MYO7BQ6PIF6 2116 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 MYOFQ9NZM1 2061 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 RP1P56715 2156 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 IGHV1OR21-1A0A087WYE8 117 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 ARHGEF35A5YM69 484 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 A8MUA0 341 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 PANO1I0J062 215 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 PIRO00625 290 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 RAD51BO15315 384 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 HCRTO43612 131 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 UGT1A9O60656 530 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 SNNO75324 88 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 SPAG6O75602 509 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 TDP2O95551 362 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 AP2A1O95782 977 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 TSPAN12O95859 305 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 KLK3P07288 261 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 GIPP09681 153 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 HSMCR30P0CW71 290 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CXCR2P25025 360 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CALCRP30988 508 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CD70P32970 193 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 RPL13AP40429 203 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 PEX19P40855 299 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 GSSP48637 474 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CASP4P49662 377 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 WNT4P56705 351 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 KRTAP10-1P60331 282 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 PFN3P60673 137 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 ARG2P78540 354 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 FGL1Q08830 312 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 EIF4EBP2Q13542 120 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 GRB7Q14451 532 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 MESDQ14696 234 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 GANABQ14697 944 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZBTB6Q15916 424 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 SAMD4BQ5PRF9 694 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 HSDL2Q6YN16 418 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 Q6ZN92 141 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CD302Q8IX05 232 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCDC71LQ8N9Z2 235 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 LILRB4Q8NHJ6 448 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 TMA16Q96EY4 203 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CMTM7Q96FZ5 175 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 TIMD4Q96H15 378 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF396Q96N95 335 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 RBM14Q96PK6 669 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 RNF2Q99496 336 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCL19Q99731 98 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 NPAS2Q99743 824 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 MED10Q9BTT4 135 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 FBXO44Q9H4M3 255 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 RNF167Q9H6Y7 350 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 SUDS3Q9H7L9 328 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 FOLH1BQ9HBA9 442 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 THUMPD1Q9NXG2 353 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 SMPD3Q9NY59 655 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CDH9Q9ULB4 789 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CLEC4AQ9UMR7 237 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 MRPS7Q9Y2R9 242 aaKnown RBP2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 CDH10Q9Y6N8 788 aa2.19□□□□□ -2.06
HMGB3P12-201ENST00000438745 TTC41PQ6P2S7 1318 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 CNTRLQ7Z7A1 2325 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 IGHV3OR16-13A0A075B7E8 117 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 NSG1A0A0A6YYJ2 146 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 TRAV17A0A0B4J275 112 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 WI2-2373I1.2A0A1W2PRP0 233 aa2.18□□□□□ -2.06
HMGB3P12-201ENST00000438745 PSMB11A5LHX3 300 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms