RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 NOL4LQ96MY1 436 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ZNF75AQ96N20 296 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 COPS8Q99627 209 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 DHRS9Q9BPW9 319 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SLC30A2Q9BRI3 323 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ASB7Q9H672 318 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CAB39LQ9H9S4 337 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 XPNPEP1Q9NQW7 623 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 C1orf123Q9NWV4 160 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 LYARQ9NX58 379 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 THUMPD1Q9NXG2 353 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 GHRLQ9UBU3 117 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PRPF19Q9UMS4 504 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ERVW-1Q9UQF0 538 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 MMACHCQ9Y4U1 282 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CHD5Q8TDI0 1954 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CCDC171Q6TFL3 1326 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 UBN2Q6ZU65 1347 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 UQCRHLA0A096LP55 91 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 LAD1O00515 517 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SLC9A3R1O14745 358 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 SUPT3HO75486 399 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 VAPBO95292 243 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PSMG1O95456 288 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 FADS2O95864 444 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 IFNA5P01569 189 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 UQCRHP07919 91 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CD55P08174 381 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SLC2A1P11166 492 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ZNF43P17038 809 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TBXA2RP21731 343 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 VDAC1P21796 283 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CD1CP29017 333 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 MPIP34949 423 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 RBM34P42696 430 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 BDKRB1P46663 353 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 P2RY1P47900 373 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NUMBP49757 651 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NKX2-5P52952 324 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ERVK-8P63133 956 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 VLDLRP98155 873 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ZP4Q12836 540 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 AQP6Q13520 282 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ARL6IP1Q15041 203 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PON3Q15166 354 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CYTH1Q15438 398 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NDUFAF6Q330K2 333 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PTPN20Q4JDL3 420 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SOHLH1Q5JUK2 328 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 BRMS1LQ5PSV4 323 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 HACD4Q5VWC8 232 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 APOBEC3HQ6NTF7 200 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 LEG1Q6P5S2 330 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SPESP1Q6UW49 350 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CD300LGQ6UXG3 332 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 LRRC31Q6UY01 552 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 FAM92BQ6ZTR7 304 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ABHD13Q7L211 337 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 H2BFWTQ7Z2G1 175 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 DPPA2Q7Z7J5 298 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ACOT1Q86TX2 421 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SYS1Q8N2H4 156 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ACBD4Q8NC06 268 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NECAP1Q8NC96 275 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 MCOLN3Q8TDD5 553 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 FAM172AQ8WUF8 416 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TFGQ92734 400 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ART4Q93070 314 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 IL22RA2Q969J5 263 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CPNE4Q96A23 557 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 RNF170Q96K19 258 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CSPG4P5Q96PW8 444 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 MBOAT4Q96T53 435 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PRRT1Q99946 306 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 HOPXQ9BPY8 73 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 SEC22CQ9BRL7 303 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TIMM29Q9BSF4 260 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TMEM121Q9BTD3 319 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 DCUN1D5Q9BTE7 237 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 RSG1Q9BU20 258 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NAA50Q9GZZ1 169 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 PATZ1Q9HBE1 687 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 BEX1Q9HBH7 125 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 EXD2Q9NVH0 621 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 STOML2Q9UJZ1 356 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NPIPA1Q9UND3 350 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 WDR45Q9Y484 360 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 POLR3HQ9Y535 204 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 JCADQ9P266 1359 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 LTBP1Q14766 1721 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 KCNE1BA0A087WTH5 132 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 IGHV7-81A0A0B4J1V7 117 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 KBTBD11-OT1A0A1B0GTJ5 212 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SLC5A10A0PJK1 596 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SMIM23A6NLE4 172 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ZNF729A6NN14 1252 aaPredicted RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 SYCE1LA8MT33 242 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 K7EN84 100 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 hCG_2039718K7EN88 272 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 GOSR2O14653 212 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms