RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PLEKHN1Q494U1 663 aaPredicted RBP11.19□□□□□ -0.62
CDH3-202ENST00000429102 PDSS1Q5T2R2 415 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 KCTD18Q6PI47 426 aaPredicted RBP11.19□□□□□ -0.62
CDH3-202ENST00000429102 SLC26A10Q8NG04 563 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 NUDT9Q9BW91 350 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 YBX2Q9Y2T7 364 aaKnown RBP11.19□□□□□ -0.62
CDH3-202ENST00000429102 TMED7-TICAM2A0A0A6YYA0 188 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 TRBV5-5A0A0J9YX44 114 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 FAM221BA6H8Z2 402 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 PRR19A6NJB7 356 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 SERPINA5P05154 406 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 MPGP29372 298 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 SERTAD2Q14140 314 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 PTCRAQ6ISU1 281 aaPredicted RBP11.19□□□□□ -0.62
CDH3-202ENST00000429102 ANGPTL5Q86XS5 388 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 OR13C8Q8NGS7 320 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 C12orf57Q99622 126 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 PRODH2Q9UF12 536 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 HHLA2Q9UM44 414 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 EML5Q05BV3 1969 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 ZNF432O94892 652 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 AHSA1O95433 338 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 CNR1P21554 472 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 FOXK1P85037 733 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 INPP5JQ15735 1006 aaPredicted RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 C11orf87Q6NUJ2 197 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 MAMDC2Q7Z304 686 aaPredicted RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 OR10H5Q8NGA6 315 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 PTPMT1Q8WUK0 201 aaPredicted RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 PHYHIPQ92561 330 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 OR52A1Q9UKL2 312 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 NPIPA5E9PKD4 350 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 NPIPB9F8W1W9 429 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 SYT7O43581 403 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 PMS2P2O95744 297 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 S100A6P06703 90 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 NME2P22392 152 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 RPS4XP62701 263 aaKnown RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 ZNF585AQ6P3V2 769 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 ETV3LQ6ZN32 361 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 NUBPLQ8TB37 319 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 LDAHQ9H6V9 325 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 EMC3Q9P0I2 261 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 HMSDA8MTL9 139 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 DNASE2O00115 360 aaPredicted RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 HCKP08631 526 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 RORAP35398 523 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 FGL1Q08830 312 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 CHAF1BQ13112 559 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 WDFY1Q8IWB7 410 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 PUSL1Q8N0Z8 303 aaKnown RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 OR51E1Q8TCB6 317 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 GPX8Q8TED1 209 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 KLHDC7BQ96G42 594 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 LCORQ96JN0 433 aaPredicted RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 CMSS1Q9BQ75 279 aaKnown RBP11.18□□□□□ -0.62
CDH3-202ENST00000429102 DMDP11532 3685 aa11.18□□□□□ -0.62
CDH3-202ENST00000429102 GABRG2P18507 467 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 SFTPDP35247 375 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 RPL27P61353 136 aaKnown RBP11.17□□□□□ -0.62
CDH3-202ENST00000429102 GLO1Q04760 184 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 IL10RAQ13651 578 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ELOCQ15369 112 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 SWI5Q1ZZU3 235 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 H3F3CQ6NXT2 135 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ZNF595Q8IYB9 648 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 EID2Q8N6I1 236 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ZSCAN1Q8NBB4 408 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 MCHR2Q969V1 340 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 CRB3Q9BUF7 120 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 CYB5R1Q9UHQ9 305 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 METTL21EPA6NDL7 271 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ABCD4O14678 606 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ZNF749O43361 778 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 CSF2RBP32927 897 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 EBPQ15125 230 aaKnown RBP11.17□□□□□ -0.62
CDH3-202ENST00000429102 TGIF1Q15583 401 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ABHD12BQ7Z5M8 362 aaPredicted RBP11.17□□□□□ -0.62
CDH3-202ENST00000429102 POLE3Q9NRF9 147 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 TICRRQ7Z2Z1 1910 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 SULT1C2O00338 296 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ZNHIT1O43257 154 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 OR2T1O43869 369 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 GIMD1P0DJR0 217 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 EMP2P54851 167 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 DMWDQ09019 674 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 NKAPLQ5M9Q1 402 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 C1orf140Q5VVS0 124 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 JMJD6Q6NYC1 403 aaPredicted RBP11.17□□□□□ -0.62
CDH3-202ENST00000429102 TFAP2EQ6VUC0 442 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 ZNF704Q6ZNC4 412 aaPredicted RBP11.17□□□□□ -0.62
CDH3-202ENST00000429102 TMEM17Q86X19 198 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 LRRC75AQ8NAA5 344 aa11.17□□□□□ -0.62
CDH3-202ENST00000429102 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms