RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 ZER1Q7Z7L7 766 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 BPIFB2Q8N4F0 458 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 OR52J3Q8NH60 311 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 ZNF420Q8TAQ5 688 aaPredicted RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 ST7LQ8TDW4 575 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 PTP4A1Q93096 173 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 C1orf147Q96MC9 270 aaPredicted RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 RBM4Q9BWF3 364 aaKnown RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 SUCNR1Q9BXA5 334 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 GCM1Q9NP62 436 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 TUBG2Q9NRH3 451 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 DCAF13Q9NV06 445 aaKnown RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 IL19Q9UHD0 177 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 PPP1R3CQ9UQK1 317 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 PPIAL4AQ9Y536 164 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 TRRAPQ9Y4A5 3859 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 PKD1L1Q8TDX9 2849 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 IGHV3-64DA0A0J9YX35 117 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 UNC119BA6NIH7 251 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 A8MXK9 166 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 MLNRO43193 412 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 CCDC22O60826 627 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 SEMG1P04279 462 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 RAC2P15153 192 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 SELEP16581 610 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 ZNF12P17014 697 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 TNFRSF1AP19438 455 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
SEC13-210ENST00000428626 ZNF154Q13106 437 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 FBXW12Q6X9E4 464 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 DPY19L2P2Q6ZN68 376 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 ADCK1Q86TW2 530 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 SPICQ8N5J4 248 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 SIGLECL1Q8N7X8 197 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 ZNF48Q96MX3 618 aaPredicted RBP13.03□□□□□ -0.32
SEC13-210ENST00000428626 WDR76Q9H967 626 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 ZNF69Q9UC07 566 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 INSIG2Q9Y5U4 225 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 SOX21Q9Y651 276 aaPredicted RBP13.03□□□□□ -0.32
SEC13-210ENST00000428626 V9GYQ6 96 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
SEC13-210ENST00000428626 CEACAM18A8MTB9 384 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 ANOS1P23352 680 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 TNFSF4P23510 183 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 PMELP40967 661 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 PAX2Q02962 417 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 KRTAP27-1Q3LI81 207 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 AWAT1Q58HT5 328 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 FAM201AQ5SY85 155 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 OR6V1Q8N148 313 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 KLHL36Q8N4N3 616 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 ATG16L2Q8NAA4 619 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 OR8G5Q8NG78 346 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 MEGF10Q96KG7 1140 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 DUX5Q96PT3 197 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 JMJD8Q96S16 334 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 ATPIF1Q9UII2 106 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 B9D1Q9UPM9 204 aa13.02□□□□□ -0.33
SEC13-210ENST00000428626 FAM32AQ9Y421 112 aaKnown RBP13.02□□□□□ -0.33
SEC13-210ENST00000428626 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 WNT2P09544 360 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 CD80P33681 288 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 CENPAP49450 140 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 HOXA4Q00056 320 aaPredicted RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 COX10Q12887 443 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 SMARCD3Q6STE5 483 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 NAA40Q86UY6 237 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 TAF15Q92804 592 aaKnown RBP eCLIP13.01□□□□□ -0.33
SEC13-210ENST00000428626 POP5Q969H6 163 aaKnown RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 DACT3Q96B18 629 aaPredicted RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 ERMAPQ96PL5 475 aaPredicted RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 NMNAT3Q96T66 252 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 COQ7Q99807 217 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 ELAC2Q9BQ52 826 aaKnown RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 OR52D1Q9H346 318 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 FN3KQ9H479 309 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
SEC13-210ENST00000428626 AURKCQ9UQB9 309 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 AUP1Q9Y679 476 aa13.01□□□□□ -0.33
SEC13-210ENST00000428626 MEGF8Q7Z7M0 2845 aa13□□□□□ -0.33
SEC13-210ENST00000428626 A0A1B0GWJ7 208 aa13□□□□□ -0.33
SEC13-210ENST00000428626 F5H5P2 479 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms