RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HS3ST2Q9Y278 367 aa14.48□□□□□ -0.09
C9orf3-206ENST00000428313 GOLT1BQ9Y3E0 138 aa14.48□□□□□ -0.09
C9orf3-206ENST00000428313 A0A0B4J2E0 115 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 A0A1B0GX12 115 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 TMEM235A6NFC5 223 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 HSPB2A8KAH6 182 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 PHOX2AO14813 284 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 TGOLN2O43493 480 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 NUDT21O43809 227 aaKnown RBP14.47□□□□□ -0.09
C9orf3-206ENST00000428313 CYTIPO60759 359 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 TBPP20226 339 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 THBS4P35443 961 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 LSSP48449 732 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 DHPSP49366 369 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-206ENST00000428313 SLC10A1Q14973 349 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 ARHGAP19Q14CB8 494 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 HSPB2Q16082 182 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 OR2T2Q6IF00 324 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 MED25Q71SY5 747 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 PEG10Q86TG7 708 aaKnown RBP14.47□□□□□ -0.09
C9orf3-206ENST00000428313 KDM8Q8N371 416 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 ZNF664Q8N3J9 261 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 OR4S1Q8NGB4 309 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 Q8WTZ3 238 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 ZNF587Q96SQ5 575 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-206ENST00000428313 SLC25A31Q9H0C2 315 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 CRLF2Q9HC73 371 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 NUMA1Q14980 2115 aa14.47□□□□□ -0.09
C9orf3-206ENST00000428313 ARPC3O15145 178 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 CD37P11049 281 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 AKR1A1P14550 325 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 HMGA1P17096 107 aaKnown RBP14.46□□□□□ -0.09
C9orf3-206ENST00000428313 LMO1P25800 156 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 CD70P32970 193 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 CD200P41217 278 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 TMEM128Q5BJH2 165 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 PDZD11Q5EBL8 140 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 GGNBP1Q5YKI7 109 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 DPY19L2P2Q6ZN68 376 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 Q6ZNB5 142 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 C5orf24Q7Z6I8 188 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ZNF615Q8N8J6 731 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 RCBTB1Q8NDN9 531 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 BHLHE23Q8NDY6 225 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 OR10AC1Q8NH08 325 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ROBO4Q8WZ75 1007 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 C2orf50Q96LR7 162 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ZNF681Q96N22 645 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 CASD1Q96PB1 797 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 NMNAT3Q96T66 252 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 SDF2Q99470 211 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 HIST1H2BLQ99880 126 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ALG12Q9BV10 488 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 AICDAQ9GZX7 198 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 OPN3Q9H1Y3 402 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-206ENST00000428313 LUZP4Q9P127 313 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 PLAGL1Q9UM63 463 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ATG4BQ9Y4P1 393 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 A0A1W2PS29 197 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 SYNDIG1LA6NDD5 238 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 CXCL1P09341 107 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 DANCRP0C864 163 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ZNF25P17030 456 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-206ENST00000428313 SUCLG1P53597 346 aaKnown RBP14.46□□□□□ -0.09
C9orf3-206ENST00000428313 IL15RAQ13261 267 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 CLLU1OSQ5K130 101 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ADGRE4PQ86SQ3 457 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 POC1AQ8NBT0 407 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 LFNGQ8NES3 379 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 AQP3Q92482 292 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 PTX4Q96A99 478 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 DTD2Q96FN9 168 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ADAD1Q96M93 576 aaKnown RBP14.46□□□□□ -0.09
C9orf3-206ENST00000428313 LMF1Q96S06 567 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 SGIP1Q9BQI5 828 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ATG101Q9BSB4 218 aa14.46□□□□□ -0.09
C9orf3-206ENST00000428313 ELOA3DA6NLF2 546 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-206ENST00000428313 H7C4K7 107 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 LEFTY2O00292 366 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 DLEU1O43261 78 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 CXCR1P25024 350 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 ELOA3BQ3SY89 546 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 SOHLH1Q5JUK2 328 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 THEM4Q5T1C6 240 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 VITQ6UXI7 678 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 ELOA3Q8NG57 546 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 OR51A4Q8NGJ6 313 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 FIBINQ8TAL6 211 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 SLC25A43Q8WUT9 341 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-206ENST00000428313 TMEM106CQ9BVX2 250 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 SLC26A1Q9H2B4 701 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 ARV1Q9H2C2 271 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 KLHDC2Q9Y2U9 406 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 SLCO1B1Q9Y6L6 691 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 LDLRAD4O15165 306 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 SFT2D2O95562 160 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 RAB32Q13637 225 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 LANCL3Q6ZV70 420 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 DEFB132Q7Z7B7 95 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms