RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LRP11Q86VZ4 500 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 OR2I1PQ8NGU4 316 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 G6PC3Q9BUM1 346 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 CRISPLD2Q9H0B8 497 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 CRLF2Q9HC73 371 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 GFOD1Q9NXC2 390 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 ICAM5Q9UMF0 924 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 RFNGQ9Y644 331 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 MELTFP08582 738 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 HOXA5P20719 270 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 LSM6P62312 80 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 REEP5Q00765 189 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 RAB11BQ15907 218 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 FAM78AQ5JUQ0 283 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 DRAM2Q6UX65 266 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 TMEM64Q6YI46 380 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 AMZ2Q86W34 360 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 GKN2Q86XP6 184 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF584Q8IVC4 421 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 PNLDC1Q8NA58 520 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 C2orf15Q8WU43 125 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 OR10C1Q96KK4 312 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 GAR1Q9NY12 217 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 LAMP5Q9UJQ1 280 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 KCNK6Q9Y257 313 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 ETV7Q9Y603 341 aa10.16□□□□□ -0.78
SEC61A1-202ENST00000424880 TEX13DA0A0J9YY54 714 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF726A6NNF4 738 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 STMND1H3BQB6 276 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 GRM6O15303 877 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 SRPX2O60687 465 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF354AO60765 605 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CSF2RAP15509 400 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CSRP1P21291 193 aaKnown RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ASCL1P50553 236 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ACTBP60709 375 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ACTG1P63261 375 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 MIDNQ504T8 468 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF529Q6P280 563 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 MAMDC2Q7Z304 686 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF550Q7Z398 422 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ADIPOR2Q86V24 386 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 PHYHIPQ92561 330 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 SLC25A21Q9BQT8 299 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 SOX7Q9BT81 388 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CHST5Q9GZS9 411 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 MRPS23Q9Y3D9 190 aaKnown RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 OR1A2Q9Y585 309 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 PIAS3Q9Y6X2 628 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CELSR3Q9NYQ7 3312 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 TCAPO15273 167 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CDC40O60508 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 NDUFB2O95178 105 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CD5P06127 495 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 SOD3P08294 240 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 NID1P14543 1247 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 GNB3P16520 340 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 DDTP30046 118 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 CD81P60033 236 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 NAAAQ02083 359 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF674Q2M3X9 581 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 LPCAT3Q6P1A2 487 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 MARCH3Q86UD3 253 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 NAXEQ8NCW5 288 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 OR2A1Q8NGT9 310 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 SLC2A12Q8TD20 617 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 MRI1Q9BV20 369 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 METTL8Q9H825 291 aaKnown RBP10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 TIMM10BQ9Y5J6 103 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 HCFC2Q9Y5Z7 792 aa10.15□□□□□ -0.78
SEC61A1-202ENST00000424880 REV3LO60673 3130 aa10.15□□□□□ -0.79
SEC61A1-202ENST00000424880 PHOX2AO14813 284 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 RAMP1O60894 148 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 SOD2P04179 222 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 PCCBP05166 539 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 ADRB3P13945 408 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 PMPCAQ10713 525 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 DUSP8Q13202 625 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 WDR38Q5JTN6 314 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 CNKSR3Q6P9H4 555 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 TRAPPC6BQ86SZ2 158 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 FJX1Q86VR8 437 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 GPBAR1Q8TDU6 330 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 SPACA5Q96QH8 159 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 ADAM19Q9H013 955 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 TAS2R4Q9NYW5 299 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 TMEM184BQ9Y519 407 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 OR4C45A6NMZ5 311 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 FAM157AC9JC47 383 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 PNPP00491 289 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 JMJD7P0C870 316 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 GLI4P10075 376 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 ACRP10323 421 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 C14orf28Q4W4Y0 310 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 LINC01590Q5TEZ4 76 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 NSUN5P2Q63ZY6 315 aa10.14□□□□□ -0.79
SEC61A1-202ENST00000424880 KIRREL2Q6UWL6 708 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms