RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 DMKNQ6E0U4 476 aaPredicted RBP15□□□□□ -0.01
CCDC28B-202ENST00000421922 CCDC36Q8IYA8 594 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF676Q8N7Q3 588 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 RND1Q92730 232 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 VKORC1Q9BQB6 163 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 OR51E2Q9H255 320 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 OSGIN2Q9Y236 505 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 TMEM269A0A1B0GVZ9 245 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 TMEM212A6NML5 194 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 EEF1E1-BLOC1S5C9J1V9 151 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 H3BMQ9 156 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 EEF1E1O43324 174 aaKnown RBP15□□□□□ -0.01
CCDC28B-202ENST00000421922 RGS9O75916 674 aaPredicted RBP15□□□□□ -0.01
CCDC28B-202ENST00000421922 LYZL6O75951 148 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 BMP5P22003 454 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 IGHV1-2P23083 117 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 DCTDP32321 178 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 CA7P43166 264 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 SLC6A9P48067 706 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 PSMA6P60900 246 aaKnown RBP15□□□□□ -0.01
CCDC28B-202ENST00000421922 GALK2Q01415 458 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 PLP2Q04941 152 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 P2RY6Q15077 328 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 TBRG1Q3YBR2 411 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 BCL2L15Q5TBC7 163 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 GDPGP1Q6ZNW5 385 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 MS4A15Q8N5U1 240 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF610Q8N9Z0 462 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 OR10S1Q8NGN2 331 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 OR2G2Q8NGZ5 317 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 OR5AK2Q8NH90 309 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 C12orf43Q96C57 262 aaKnown RBP15□□□□□ -0.01
CCDC28B-202ENST00000421922 KCNJ15Q99712 375 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 COQ7Q99807 217 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 OR2H1Q9GZK4 316 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 MOB1AQ9H8S9 216 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 BRD7Q9NPI1 651 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 DDX28Q9NUL7 540 aaKnown RBP15□□□□□ -0.01
CCDC28B-202ENST00000421922 FBXL3Q9UKT7 428 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 GSTK1Q9Y2Q3 226 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 CFAP46Q8IYW2 2715 aa15□□□□□ -0.01
CCDC28B-202ENST00000421922 SLC22A1O15245 554 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 ATXN7O15265 892 aaPredicted RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 CD1AP06126 327 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 ANXA2P07355 339 aaKnown RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 PATE4P0C8F1 98 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 COX5AP20674 150 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 CX3CR1P49238 355 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 PRKXP51817 358 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 HIST1H3AP68431 136 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 HIKESHIQ53FT3 197 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 CCDC92Q53HC0 331 aaPredicted RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 HIST2H3PS2Q5TEC6 136 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF774Q6NX45 483 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 SLC16A12Q6ZSM3 486 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 HIST2H3AQ71DI3 136 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 C1orf162Q8NEQ5 155 aaPredicted RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 OR1F12Q8NHA8 337 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 AKR7LQ8NHP1 331 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 GHSRQ92847 366 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 C4orf45Q96LM5 186 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 PNRC2Q9NPJ4 139 aaKnown RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF629Q9UEG4 869 aaPredicted RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 N6AMT1Q9Y5N5 214 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 SIRT4Q9Y6E7 314 aaPredicted RBP14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF462Q96JM2 2506 aa14.99□□□□□ -0.01
CCDC28B-202ENST00000421922 TENM4Q6N022 2769 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 A0A0G2JNJ9 132 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 IQCMA0A1B0GVH7 501 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 OR6C6A6NF89 314 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 F5H5K5 113 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 MSTNO14793 375 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 CGAP01215 116 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 HLA-HP01893 362 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 PLA2G2AP14555 144 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 IL32P24001 234 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 CCR9P51686 369 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 TPTEP56180 551 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 PSG4Q00888 419 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 PABPC1L2AQ5JQF8 200 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 FDX2Q6P4F2 183 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 LUZP2Q86TE4 346 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 CXorf67Q86X51 503 aaPredicted RBP14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 GABRG1Q8N1C3 465 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF433Q8N7K0 673 aaPredicted RBP14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 KBTBD8Q8NFY9 601 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 HSD17B8Q92506 261 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 BCL2L2Q92843 193 aaPredicted RBP14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 RPL3LQ92901 407 aaKnown RBP14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 SP140LQ9H930 580 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 Q9UFV3 132 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 OR52A1Q9UKL2 312 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF281Q9Y2X9 895 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 MEMO1Q9Y316 297 aa14.98□□□□□ -0.01
CCDC28B-202ENST00000421922 NAV2Q8IVL1 2488 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 M0R135 149 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 CCL21O00585 134 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 HOXB1P14653 301 aaPredicted RBP14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 NANOS3P60323 173 aaKnown RBP14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 VBP1P61758 197 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms