RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FOLR3P41439 243 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 TSPAN7P41732 249 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 SSR4P51571 173 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 HACD4Q5VWC8 232 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 ABHD12BQ7Z5M8 362 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 MAML2Q8IZL2 1156 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 GINS4Q9BRT9 223 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 POTEKPQ9BYX7 375 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 TMEM138Q9NPI0 162 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 GDF2Q9UK05 429 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 PCDHGA5Q9Y5G8 931 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ETV7Q9Y603 341 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 MAP1BP46821 2468 aaKnown RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 IGHV1-45A0A0A0MS14 117 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 SLC17A2O00624 439 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 SIX6O95475 246 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 LDOC1O95751 146 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 CD3DP04234 171 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ACSM4P0C7M7 580 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 LIPCP11150 499 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ABOP16442 354 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 HTR2BP41595 481 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 SELENOPP49908 381 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 BPIFB3P59826 476 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ZXDAP98168 799 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 NKPD1Q17RQ9 610 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 OPN5Q6U736 354 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ZNF283Q8N7M2 679 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 OR51S1Q8NGJ8 323 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ELP5Q8TE02 316 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 OR2M2Q96R28 347 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 G6PC2Q9NQR9 355 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 MGAT4CQ9UBM8 478 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 CCDC163A0A0D9SF12 145 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 C7orf66A4D0T2 115 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 DNASE1P24855 282 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 RFC3P40938 356 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 PRSS12P56730 875 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 ZP4Q12836 540 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 SCGB2B2Q4G0G5 96 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 FAM198BQ6UWH4 519 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 ZNF704Q6ZNC4 412 aaPredicted RBP9.73□□□□□ -0.85
DDX56-203ENST00000421223 FAM57BQ71RH2 274 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 OR11H4Q8NGC9 324 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 OR52N4Q8NGI2 321 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 OR4D6Q8NGJ1 314 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 OR4C16Q8NGL9 310 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 PBOV1Q9GZY1 135 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 CACNA1HO95180 2353 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 A0A1W2PPC1 479 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 ANKRD20A5PA0PJZ0 165 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 TMEM235A6NFC5 223 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 PYCARD-AS1I3L0S3 204 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 CTDSPLO15194 276 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 NOS1APO75052 506 aaPredicted RBP9.73□□□□□ -0.85
DDX56-203ENST00000421223 IGHMP01871 453 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 COX6A1P12074 109 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 MOGAT2Q3SYC2 334 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 TMEM244Q5VVB8 128 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 ANKRD16Q6P6B7 361 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 NAA40Q86UY6 237 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 ZNF101Q8IZC7 436 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 OR5D18Q8NGL1 313 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 ADAT3Q96EY9 351 aaPredicted RBP9.73□□□□□ -0.85
DDX56-203ENST00000421223 HYLS1Q96M11 299 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 SLC5A6Q9Y289 635 aa9.73□□□□□ -0.85
DDX56-203ENST00000421223 CNOT1A5YKK6 2376 aaKnown RBP9.73□□□□□ -0.85
DDX56-203ENST00000421223 A0A1B0GVI7 797 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 OR2M5A3KFT3 312 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 TNFSF11O14788 317 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 TRAF3IP2O43734 574 aaPredicted RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 STK17BO94768 372 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 ZNF20P17024 532 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 STARP49675 285 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 ZNF81P51508 661 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 GNG2P59768 71 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 CREB3L2Q70SY1 520 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 RNF144BQ7Z419 303 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 CD163Q86VB7 1156 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 OR10S1Q8NGN2 331 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 WDR89Q96FK6 387 aaPredicted RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 ZNF385AQ96PM9 386 aaKnown RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 MRI1Q9BV20 369 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 SLC23A1Q9UHI7 598 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 NXT1Q9UKK6 140 aaKnown RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 PPIEQ9UNP9 301 aaKnown RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 LHFPL6Q9Y693 200 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 PCP4L1A6NKN8 68 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 NPIPA2E9PIF3 369 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 NPIPA3F8WFD2 350 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 SULT1B1O43704 296 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 TTRP02766 147 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 ANOS1P23352 680 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 GABREP78334 506 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms