RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SAMD4AQ9UPU9 718 aaKnown RBP14.62□□□□□ -0.07
MSH6-203ENST00000420813 AURKCQ9UQB9 309 aa14.62□□□□□ -0.07
MSH6-203ENST00000420813 IER3IP1Q9Y5U9 82 aa14.62□□□□□ -0.07
MSH6-203ENST00000420813 RER1O15258 196 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 ZNF12P17014 697 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 CPT2P23786 658 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 CRABP1P29762 137 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 MDH1P40925 334 aaKnown RBP14.61□□□□□ -0.07
MSH6-203ENST00000420813 MDH2P40926 338 aaKnown RBP14.61□□□□□ -0.07
MSH6-203ENST00000420813 ERFP50548 548 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 HIST1H3AP68431 136 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 ZMYND11Q15326 602 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 ARMCX4Q5H9R4 360 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 HIST2H3PS2Q5TEC6 136 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 C1orf94Q6P1W5 598 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 DNM1P34Q6PK57 102 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 HIST2H3AQ71DI3 136 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 MUC20Q8N307 709 aaPredicted RBP14.61□□□□□ -0.07
MSH6-203ENST00000420813 GJC3Q8NFK1 279 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 APOBEC3DQ96AK3 386 aaPredicted RBP14.61□□□□□ -0.07
MSH6-203ENST00000420813 CMTM5Q96DZ9 223 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 COQ7Q99807 217 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 HDHD2Q9H0R4 259 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 MMP26Q9NRE1 261 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 DCAF13Q9NV06 445 aaKnown RBP14.61□□□□□ -0.07
MSH6-203ENST00000420813 POLR1DQ9Y2S0 133 aa14.61□□□□□ -0.07
MSH6-203ENST00000420813 TRBV4-1A0A0J9YWV2 114 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 UNC119BA6NIH7 251 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 TRAPPC2LH3BP13 241 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 TMEM178BH3BS89 294 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 IMPA2O14732 288 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 DBHP09172 617 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 CDKN2AP42771 156 aaKnown RBP14.6□□□□□ -0.07
MSH6-203ENST00000420813 MMP16P51512 607 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 PSME3P61289 254 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 UBA52P62987 128 aaKnown RBP14.6□□□□□ -0.07
MSH6-203ENST00000420813 ZNF154Q13106 437 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 HNRNPA0Q13151 305 aaKnown RBP14.6□□□□□ -0.07
MSH6-203ENST00000420813 SEC23BQ15437 767 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 OTPQ5XKR4 325 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 GLYATQ6IB77 296 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 SMARCD3Q6STE5 483 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 OR8G5Q8NG78 346 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 OR13G1Q8NGZ3 307 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 FUZQ9BT04 418 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 MRI1Q9BV20 369 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 GCM1Q9NP62 436 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 SPAG4Q9NPE6 437 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 DDX28Q9NUL7 540 aaKnown RBP14.6□□□□□ -0.07
MSH6-203ENST00000420813 IL20RAQ9UHF4 553 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 NUP50Q9UKX7 468 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 LRCH1Q9Y2L9 728 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 INSIG2Q9Y5U4 225 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 AUP1Q9Y679 476 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 LHFPL6Q9Y693 200 aa14.6□□□□□ -0.07
MSH6-203ENST00000420813 RRP9O43818 475 aaKnown RBP14.59□□□□□ -0.07
MSH6-203ENST00000420813 SEC61A1P61619 476 aaKnown RBP14.59□□□□□ -0.07
MSH6-203ENST00000420813 COX10Q12887 443 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 KRT72Q14CN4 511 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 ESCO2Q56NI9 601 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 RBMS3Q6XE24 437 aaKnown RBP14.59□□□□□ -0.07
MSH6-203ENST00000420813 OR5AS1Q8N127 324 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 ATG16L2Q8NAA4 619 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 SGMS2Q8NHU3 365 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 C22orf15Q8WYQ4 148 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 ZNF582Q96NG8 517 aaPredicted RBP14.59□□□□□ -0.07
MSH6-203ENST00000420813 GPA33Q99795 319 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
MSH6-203ENST00000420813 PTTG3PQ9NZH4 202 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 OR5V1Q9UGF6 321 aa14.59□□□□□ -0.07
MSH6-203ENST00000420813 IGLV1-36A0A0B4J1U3 117 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 CEACAM18A8MTB9 384 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 IQCF6A8MYZ5 107 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 DCTN6O00399 190 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 ARPC3O15145 178 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 GMNNO75496 209 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 FSTL3O95633 263 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 PRDX6P30041 224 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 SRP9P49458 86 aaKnown RBP14.58□□□□□ -0.08
MSH6-203ENST00000420813 SMIM11AP58511 58 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 HLXQ14774 488 aaPredicted RBP14.58□□□□□ -0.08
MSH6-203ENST00000420813 ZNF181Q2M3W8 571 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 OR2T2Q6IF00 324 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 COLCA1Q6ZS62 124 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 DOK3Q7L591 496 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 FAM86B1Q8N7N1 296 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 FANK1Q8TC84 345 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 MEGF10Q96KG7 1140 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 TSSK2Q96PF2 358 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 ERMAPQ96PL5 475 aaPredicted RBP14.58□□□□□ -0.08
MSH6-203ENST00000420813 SLC30A2Q9BRI3 323 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 MYLK2Q9H1R3 596 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 GORASP2Q9H8Y8 452 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 B9D1Q9UPM9 204 aa14.58□□□□□ -0.08
MSH6-203ENST00000420813 A0A1B0GWJ7 208 aa14.57□□□□□ -0.08
MSH6-203ENST00000420813 SPRY1O43609 319 aaPredicted RBP14.57□□□□□ -0.08
MSH6-203ENST00000420813 DIRAS1O95057 198 aa14.57□□□□□ -0.08
MSH6-203ENST00000420813 PPP1R3DO95685 299 aa14.57□□□□□ -0.08
MSH6-203ENST00000420813 WNT2P09544 360 aa14.57□□□□□ -0.08
MSH6-203ENST00000420813 SLC6A6P31641 620 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms