RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ACOT11Q8WXI4 607 aaPredicted RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 BCL2L2Q92843 193 aaPredicted RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 MCUR1Q96AQ8 359 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 C7orf34Q96L11 122 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 MUS81Q96NY9 551 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 FOXN4Q96NZ1 517 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 FYTTD1Q96QD9 318 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 TSPAN32Q96QS1 320 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ZNF347Q96SE7 839 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 CCL19Q99731 98 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 BDH2Q9BUT1 245 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 LINC00470Q9BZP3 86 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 SLC19A3Q9BZV2 496 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 POLR2J2Q9GZM3 115 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 POLR2J3Q9H1A7 115 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 ESRP2Q9H6T0 727 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 GORASP2Q9H8Y8 452 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 INIPQ9NRY2 104 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 GAR1Q9NY12 217 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 VNN3Q9NY84 501 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 TAS2R1Q9NYW7 299 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 HSPB7Q9UBY9 170 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 POU2F3Q9UKI9 436 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ADAM18Q9Y3Q7 739 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 FAM32AQ9Y421 112 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 PRRC2AP48634 2157 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 PLCE1Q9P212 2302 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 IGKV1D-43A0A0B4J1Z2 117 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 IGHV1-18A0A0C4DH31 117 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 LOC102725191A0A1B0GVB3 256 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 A0A1W2PRQ8 180 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 SH3PXD2BA1X283 911 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 SHISA9B4DS77 424 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 E7EQL1 145 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ATP6V1G2-DDX39BF2Z307 99 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 IMPA2O14732 288 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 LDLRAD4O15165 306 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 GYG2O15488 501 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR10H3O60404 316 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 TRMUO75648 421 aaKnown RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 GADD45GO95257 159 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 BCL10O95999 233 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 IGHG1P01857 330 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 HLA-HP01893 362 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 SOD3P08294 240 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 QDPRP09417 244 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 PGA4P0DJD7 388 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 PGA3P0DJD8 388 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 CD79AP11912 226 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ZNF26P17031 533 aaPredicted RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 RPL4P36578 427 aaKnown RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 ACVR1BP36896 505 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 CDKN1AP38936 164 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 PRPS1P60891 318 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 UBE2NP61088 152 aaKnown RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 BLOC1S1P78537 153 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 TGFBR3Q03167 851 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 CD47Q08722 323 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ZP4Q12836 540 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 FHL1Q13642 323 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 IQCCQ4KMZ1 466 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR7E24Q6IFN5 339 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 LCN8Q6JVE9 175 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 TMEM65Q6PI78 240 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 DCDC5Q6ZRR9 648 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ABHD12BQ7Z5M8 362 aaPredicted RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 OAFQ86UD1 273 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 MDP1Q86V88 176 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 SKA3Q8IX90 412 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 LRRC18Q8N456 261 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 LRRC75AQ8NAA5 344 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 NOXO1Q8NFA2 376 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR4K5Q8NGD3 323 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR9Q2Q8NGE9 314 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR6X1Q8NH79 312 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 FGFBP3Q8TAT2 258 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 NSMAFQ92636 917 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 TMEM54Q969K7 222 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 MCHR2Q969V1 340 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 RASD2Q96D21 266 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 SLC25A44Q96H78 314 aaPredicted RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 CMTM3Q96MX0 182 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 C8orf49Q96NF6 230 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 GPA33Q99795 319 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 SH3GL3Q99963 347 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 TMEM204Q9BSN7 226 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 KATNB1Q9BVA0 655 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 MLST8Q9BVC4 326 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 CADM1Q9BY67 442 aaKnown RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR10A4Q9H209 315 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 OR51B6Q9H340 312 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 RERGLQ9H628 205 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 NGBQ9NPG2 151 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 B3GAT2Q9NPZ5 323 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 CISD1Q9NZ45 108 aaKnown RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 GLTPQ9NZD2 209 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ZNF224Q9NZL3 707 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ACTR3BQ9P1U1 418 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ZNF346Q9UL40 294 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms