RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TVP23AA6NH52 213 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 F5H5K5 113 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 ZNF593O00488 134 aaPredicted RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 SURF4O15260 269 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 PRODHO43272 600 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 TPD52L2O43399 206 aaKnown RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 TIMM8AO60220 97 aaPredicted RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 GLCEO94923 617 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 CLPTM1O96005 669 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 GYPBP06028 91 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 GSTT1P30711 240 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 GGT2P36268 569 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 SLC15A1P46059 708 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 ERVS71-1P61550 626 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 RPS7P62081 194 aaKnown RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 MALLQ13021 153 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 KLHL12Q53G59 568 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 TEX30Q5JUR7 227 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 SLC35D3Q5M8T2 416 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 SPATA46Q5T0L3 261 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 PLBD1Q6P4A8 553 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 DNM1P46Q6ZS02 220 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 MARS2Q96GW9 593 aaKnown RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 DIRC2Q96SL1 478 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 RBM4BQ9BQ04 359 aaKnown RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 GABARAPL1Q9H0R8 117 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 TPK1Q9H3S4 243 aa12.61□□□□□ -0.39
CHD1-202ENST00000414220 MRPL22Q9NWU5 206 aaKnown RBP12.61□□□□□ -0.39
CHD1-202ENST00000414220 FAM183AA6NL82 134 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 C17orf100A8MU93 164 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 NGFP01138 241 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 APOC1P02654 83 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 NAT2P11245 290 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 IGFBP5P24593 272 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 ZNF81P51508 661 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 MAD2L1BPQ15013 274 aaPredicted RBP12.6□□□□□ -0.39
CHD1-202ENST00000414220 PTGES3Q15185 160 aaKnown RBP12.6□□□□□ -0.39
CHD1-202ENST00000414220 ALKBH6Q3KRA9 238 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 CLEC9AQ6UXN8 241 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 RFPL4BQ6ZWI9 263 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 CXXC5Q7LFL8 322 aaKnown RBP12.6□□□□□ -0.39
CHD1-202ENST00000414220 ERI1Q8IV48 349 aaKnown RBP12.6□□□□□ -0.39
CHD1-202ENST00000414220 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
CHD1-202ENST00000414220 ZNF786Q8N393 782 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 C10orf105Q8TEF2 133 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 STMN2Q93045 179 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 INTS14Q96SY0 518 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 EGLN1Q9GZT9 426 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 SP140LQ9H930 580 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 NKIRAS2Q9NYR9 191 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 COMMD3-BMI1R4GMX3 469 aa12.6□□□□□ -0.39
CHD1-202ENST00000414220 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 IGHV4-30-2A0A087WSY4 118 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 LCATP04180 440 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 CLUP10909 449 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 RAC2P15153 192 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 SELEP16581 610 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 TNFSF4P23510 183 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 SLC6A9P48067 706 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 MSMPQ1L6U9 139 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 LCN1P1Q5VSP4 162 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 TMEM236Q5W0B7 351 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 KDM4DQ6B0I6 523 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 CFAP77Q6ZQR2 320 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 ZNF511Q8NB15 262 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 SLC7A6Q92536 515 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 RDH5Q92781 318 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 COPS4Q9BT78 406 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 TOR3AQ9H497 397 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 WDR76Q9H967 626 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
CHD1-202ENST00000414220 OAZ3Q9UMX2 235 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
CHD1-202ENST00000414220 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 ZNF878C9JN71 531 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 M0R135 149 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 LY6HO94772 140 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 DBHP09172 617 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 ACHEP22303 614 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 USF1P22415 310 aaPredicted RBP12.58□□□□□ -0.4
CHD1-202ENST00000414220 HSD11B1P28845 292 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 RAD23AP54725 363 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 GRB2P62993 217 aaKnown RBP12.58□□□□□ -0.4
CHD1-202ENST00000414220 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
CHD1-202ENST00000414220 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.4
CHD1-202ENST00000414220 DRAM2Q6UX65 266 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 RHOUQ7L0Q8 258 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
CHD1-202ENST00000414220 CIARTQ8N365 385 aaPredicted RBP12.58□□□□□ -0.4
CHD1-202ENST00000414220 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 ZNRF4Q8WWF5 429 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 HAVCR1Q96D42 359 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 CMBLQ96DG6 245 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms