RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 MBNL2Q5VZF2 373 aaKnown RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 ZCCHC24Q8N2G6 241 aaKnown RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 CBR4Q8N4T8 237 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 ZMYND19Q96E35 227 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 Q96MF0 132 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 ATF6BQ99941 703 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 OR2J1Q9GZK6 312 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 BARX1Q9HBU1 254 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 EIF3KQ9UBQ5 218 aaKnown RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 H3BSA7 217 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 SELENOFO60613 162 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 LY6HO94772 140 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 IGHV3-13P01766 116 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 SPARCP09486 303 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 ACSM4P0C7M7 580 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 ANOS1P23352 680 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 EFNA4P52798 201 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 KLF3P57682 345 aaPredicted RBP11.27□□□□□ -0.61
HDAC8-210ENST00000412342 ECH1Q13011 328 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 DPY19L4Q7Z388 723 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 DCXRQ7Z4W1 244 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
HDAC8-210ENST00000412342 LURAP1LQ8IV03 231 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 OR2AJ1Q8NGZ0 328 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 SYNPRQ8TBG9 265 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 TMEM163Q8TC26 289 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.61
HDAC8-210ENST00000412342 IPCEF1Q8WWN9 437 aaPredicted RBP11.27□□□□□ -0.61
HDAC8-210ENST00000412342 OTULINQ96BN8 352 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 PLEKHA8Q96JA3 519 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 INTS14Q96SY0 518 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 AMELYQ99218 206 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 PITX2Q99697 317 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 CDADC1Q9BWV3 514 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 TEX12Q9BXU0 123 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 RIBC2Q9H4K1 309 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 ELOVL3Q9HB03 270 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 DUSP13Q9UII6 198 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 STARD10Q9Y365 291 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 ACANP16112 2415 aa11.27□□□□□ -0.61
HDAC8-210ENST00000412342 TRIM64A6NGJ6 449 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 J3QW42 95 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 M0R233 179 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
HDAC8-210ENST00000412342 ADRA2AP08913 450 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 APOFQ13790 326 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 CLEC12BQ2HXU8 276 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 KLHL12Q53G59 568 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 ARL9Q6T311 187 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 ERI1Q8IV48 349 aaKnown RBP11.26□□□□□ -0.61
HDAC8-210ENST00000412342 OR6N2Q8NGY6 317 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 RNF133Q8WVZ7 376 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 SLAMF6Q96DU3 332 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 MBOAT4Q96T53 435 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 TEAD3Q99594 435 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 C9orf16Q9BUW7 83 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 C1QTNF5Q9BXJ0 243 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 PRRG3Q9BZD7 231 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 KLHDC2Q9Y2U9 406 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 GRIP1Q9Y3R0 1128 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 CR1P17927 2039 aa11.26□□□□□ -0.61
HDAC8-210ENST00000412342 A0A1W2PPW3 197 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 TLX2O43763 284 aaPredicted RBP11.25□□□□□ -0.61
HDAC8-210ENST00000412342 SSX4O60224 188 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 TUBG1P23258 451 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 RGS6P49758 472 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 MMP15P51511 669 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 NUDT6P53370 316 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 PSG7Q13046 419 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 GGTLC2Q14390 218 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 ZNF718Q3SXZ3 478 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 NXNL2Q5VZ03 156 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 UNQ6126/PRO20091Q6UXV3 157 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 NAA40Q86UY6 237 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
HDAC8-210ENST00000412342 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 OTOSQ8NHW6 89 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 GTF3AQ92664 365 aaKnown RBP11.25□□□□□ -0.61
HDAC8-210ENST00000412342 STMN2Q93045 179 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 APOBEC3DQ96AK3 386 aaPredicted RBP11.25□□□□□ -0.61
HDAC8-210ENST00000412342 HRASLS5Q96KN8 279 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 IL4I1Q96RQ9 567 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 VRK1Q99986 396 aaPredicted RBP11.25□□□□□ -0.61
HDAC8-210ENST00000412342 TPK1Q9H3S4 243 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 DYNLRB1Q9NP97 96 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 TUBG2Q9NRH3 451 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 SLCO1C1Q9NYB5 712 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 TAAR3PQ9P1P4 343 aa11.25□□□□□ -0.61
HDAC8-210ENST00000412342 TEP1Q99973 2627 aaKnown RBP11.25□□□□□ -0.61
HDAC8-210ENST00000412342 A0A096LNT2 108 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms