RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 FCN3O75636 299 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 IGHV4-34P06331 123 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 FECHP22830 423 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TAF10Q12962 218 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 VMA21Q3ZAQ7 101 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CYHR1Q6ZMK1 362 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 OR13J1Q8NGT2 312 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF296Q8WUU4 475 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ART4Q93070 314 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 STARD4Q96DR4 205 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MAP6Q96JE9 813 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MSLNLQ96KJ4 702 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 NKX2-4Q9H2Z4 354 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 DUSP21Q9H596 190 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SFXN1Q9H9B4 322 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 UQCR10Q9UDW1 63 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 LSM2Q9Y333 95 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TRPM2O94759 1503 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TEX14Q8IWB6 1497 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PNPLA6Q8IY17 1366 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CDK13Q14004 1512 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 HEPACAM2A8MVW5 462 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF623O75123 536 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 INAFM2P0DMQ5 153 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 S100A11P31949 105 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CXCR4P61073 352 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 B4GALNT1Q00973 533 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 FZD5Q13467 585 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF66Q6ZN08 573 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF761Q86XN6 746 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 RNF130Q86XS8 419 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 OR4K14Q8NGD5 310 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 DPF2Q92785 391 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 NEUROG1Q92886 237 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TBX15Q96SF7 602 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SYNPO2LQ9H987 977 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 YAE1D1Q9NRH1 226 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PEF1Q9UBV8 284 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 RIC1Q4ADV7 1423 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 OR51F1A6NGY5 319 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 GGTLC3B5MD39 225 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 H3BSH0 61 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 MSCO60682 206 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 RBP4P02753 201 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 SP1P08047 785 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 SOX3P41225 446 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 PTGIRP43119 386 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 RAD52P43351 418 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 SLC6A11P48066 632 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 PRRX1P54821 245 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 DCAF7P61962 342 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ROM1Q03395 351 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF528Q3MIS6 628 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ACSF3Q4G176 576 aaPredicted RBP4.21□□□□□ -1.73
PTPN13-202ENST00000411767 KHDC1Q4VXA5 237 aaKnown RBP4.21□□□□□ -1.73
PTPN13-202ENST00000411767 TEX44Q53QW1 395 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 RPUSD3Q6P087 351 aaKnown RBP4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ANKRD33Q7Z3H0 272 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 CA13Q8N1Q1 262 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 OR1L8Q8NGR8 309 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 WDR20Q8TBZ3 569 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 GPR152Q8TDT2 470 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 KCTD12Q96CX2 325 aaKnown RBP4.21□□□□□ -1.73
PTPN13-202ENST00000411767 RPF2Q9H7B2 306 aaKnown RBP4.21□□□□□ -1.73
PTPN13-202ENST00000411767 PLSCR3Q9NRY6 295 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 FOXJ3Q9UPW0 622 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ASB1Q9Y576 335 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 FLVCR1Q9Y5Y0 555 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ANKRD61A6NGH8 418 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 DCTN6O00399 190 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 HYAL3O43820 417 aaPredicted RBP4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ENTPD3O75355 529 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 NXPH2O95156 264 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 CRPP02741 224 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 CPOXP36551 454 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 DCTP40126 519 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 MGAT3Q09327 533 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 PMCHL1Q16048 86 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 OR2AK2Q8NG84 335 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 OR4D11Q8NGI4 311 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 OR51A7Q8NH64 312 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 ANGPTL4Q9BY76 406 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 FBXL15Q9H469 300 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 FAM198AQ9UFP1 575 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 CHST2Q9Y4C5 530 aa4.21□□□□□ -1.73
PTPN13-202ENST00000411767 CDC42BPAQ5VT25 1732 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 MFNGO00587 321 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 B4GALT2O60909 372 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 GALTP07902 379 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CHRM2P08172 466 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CXCL8P10145 99 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CR2P20023 1033 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OPRD1P41143 372 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 WNT5AP41221 380 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 WNT3P56703 355 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CLDN17P56750 224 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 NR2C2APQ86WQ0 139 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 REM2Q8IYK8 340 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms