RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 LIMS3P0CW19 117 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 LIMS4P0CW20 117 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 LOXP28300 417 aaPredicted RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 APLNRP35414 380 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 GRB2P62993 217 aaKnown RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 NAAAQ02083 359 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 MVKQ03426 396 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 TBC1D28Q2M2D7 210 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 CDONQ4KMG0 1287 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 TMEM154Q6P9G4 183 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 PLEKHG7Q6ZR37 379 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 SSX6Q7RTT6 188 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 MYPOPQ86VE0 399 aaPredicted RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 ESRP2Q9H6T0 727 aaKnown RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 CENPMQ9NSP4 180 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 PAK1IP1Q9NWT1 392 aaPredicted RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 SLCO1C1Q9NYB5 712 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 ADGRG4Q8IZF6 3080 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 HELZ2Q9BYK8 2649 aaKnown RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 ICE1Q9Y2F5 2266 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 PTGES3LE9PB15 166 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 SIAH2O43255 324 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 APOC1P02654 83 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 PCSK6P29122 969 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 HTR5AP47898 357 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 GDI2P50395 445 aaKnown RBP13.18□□□□□ -0.3
LSM5-207ENST00000410044 NR1H2P55055 460 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 LHFPL3Q86UP9 236 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 SYS1Q8N2H4 156 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 RFLNBQ8N5W9 214 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 MRPL48Q96GC5 212 aaKnown RBP13.18□□□□□ -0.3
LSM5-207ENST00000410044 RADILQ96JH8 1075 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 TBX5Q99593 518 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 TMEM204Q9BSN7 226 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 MROQ9BYG7 248 aa13.18□□□□□ -0.3
LSM5-207ENST00000410044 MRM2Q9UI43 246 aaKnown RBP13.18□□□□□ -0.3
LSM5-207ENST00000410044 IGHV2OR16-5A0A0B4J2B6 119 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.17□□□□□ -0.3
LSM5-207ENST00000410044 A1L4Q6 167 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 METTL15A6NJ78 407 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 J3QW42 95 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 ABHD16AO95870 558 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 CRYAAP02489 173 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 ACSM4P0C7M7 580 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 C21orf33P30042 268 aaPredicted RBP13.17□□□□□ -0.3
LSM5-207ENST00000410044 TPTEP56180 551 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 IRF3Q14653 427 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 LRRN1Q6UXK5 716 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 COLCA1Q6ZS62 124 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 PRSS48Q7RTY5 328 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.17□□□□□ -0.3
LSM5-207ENST00000410044 SPTSSAQ969W0 71 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 PLPPR2Q96GM1 343 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 ELOVL3Q9HB03 270 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 TBCCD1Q9NVR7 557 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 CAB39Q9Y376 341 aaPredicted RBP13.17□□□□□ -0.3
LSM5-207ENST00000410044 LRP12Q9Y561 859 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 CADP27708 2225 aa13.17□□□□□ -0.3
LSM5-207ENST00000410044 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 ACOD1A6NK06 481 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 RGS10O43665 173 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 SRSF10O75494 262 aaKnown RBP13.16□□□□□ -0.3
LSM5-207ENST00000410044 KRT8P05787 483 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 DBHP09172 617 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 TACSTD2P09758 323 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 MYL12AP19105 171 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 CALCRP30988 508 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 ETV1P50549 477 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 RIDAP52758 137 aaKnown RBP13.16□□□□□ -0.3
LSM5-207ENST00000410044 ACTA2P62736 377 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 ACTG2P63267 376 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 BSPH1Q075Z2 132 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 TAF13Q15543 124 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 KCTD21Q4G0X4 260 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 C1orf174Q8IYL3 243 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 NANOGP1Q8N7R0 232 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 ZNF485Q8NCK3 441 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 SGCDQ92629 289 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 NR1H4Q96RI1 486 aaPredicted RBP13.16□□□□□ -0.3
LSM5-207ENST00000410044 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 C1QTNF5Q9BXJ0 243 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 CDH20Q9HBT6 801 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
LSM5-207ENST00000410044 ERVK-18Q9QC07 812 aa13.16□□□□□ -0.3
LSM5-207ENST00000410044 TENM4Q6N022 2769 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms