RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 COX15Q7KZN9 410 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 KRT222Q8N1A0 295 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 PNKDQ8N490 385 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 ARRDC1Q8N5I2 433 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 OR9G1Q8NH87 305 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 OR51E1Q8TCB6 317 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 PHF10Q8WUB8 498 aaKnown RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 IFT81Q8WYA0 676 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 DNASE2BQ8WZ79 361 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TMEM230Q96A57 120 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 DCUN1D5Q9BTE7 237 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 REEP1Q9H902 201 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TMBIM4Q9HC24 238 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 ISYNA1Q9NPH2 558 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TMEM9BQ9NQ34 198 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TREX1Q9NSU2 369 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 SLC39A1Q9NY26 324 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 DHRS4-AS1Q9P1J3 65 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TRAV39A0A0B4J263 110 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 SULT1C2O00338 296 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ZW10O43264 779 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 SLC16A7O60669 478 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ADAP1O75689 374 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 AMBPP02760 352 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 PET100P0DJ07 73 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 GABRG2P18507 467 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 USF1P22415 310 aaPredicted RBP3.78□□□□□ -1.8
LSM5-205ENST00000409952 GNRHRP30968 328 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ARL2P36404 184 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 MAGEA2P43356 314 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 MAGEA3P43357 314 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 HCAR3P49019 387 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 AP1S2P56377 157 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 RPL36AP83881 106 aaKnown RBP3.78□□□□□ -1.8
LSM5-205ENST00000409952 ASAH1Q13510 395 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 PON2Q15165 354 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 PRR4Q16378 134 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 C2CD6Q53TS8 623 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 C18orf65Q6ZTR6 163 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 PAGE2Q7Z2X7 111 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 FUNDC1Q8IVP5 155 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 CA13Q8N1Q1 262 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 OR4F15Q8NGB8 312 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 OR52E2Q8NGJ4 325 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 CHMP6Q96FZ7 201 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 PGLYRP2Q96PD5 576 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 RANBP9Q96S59 729 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 LITAFQ99732 161 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 TSG101Q99816 390 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ADNPQ9H2P0 1102 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 RPF2Q9H7B2 306 aaKnown RBP3.78□□□□□ -1.8
LSM5-205ENST00000409952 EMC3Q9P0I2 261 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 CES1P1Q9UKY3 287 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ST3GAL6Q9Y274 331 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ACOT9Q9Y305 439 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 OR51B2Q9Y5P1 312 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 FLVCR1Q9Y5Y0 555 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 KCNE3Q9Y6H6 103 aa3.78□□□□□ -1.8
LSM5-205ENST00000409952 ENSAO43768 121 aaKnown RBP3.77□□□□□ -1.81
LSM5-205ENST00000409952 ZNF253O75346 499 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 LYPLA1O75608 230 aaPredicted RBP3.77□□□□□ -1.81
LSM5-205ENST00000409952 ATP5HO75947 161 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 VENTXO95231 258 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 GIMD1P0DJR0 217 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 PSKH1P11801 424 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 PGAM2P15259 253 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 GGT1P19440 569 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 PRKAR2BP31323 418 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 FMO3P31513 532 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 RPL14P50914 215 aaKnown RBP3.77□□□□□ -1.81
LSM5-205ENST00000409952 RND2P52198 227 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 APOC4P55056 127 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 RPL18AQ02543 176 aaKnown RBP3.77□□□□□ -1.81
LSM5-205ENST00000409952 FADDQ13158 208 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 MED21Q13503 144 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 FLOT2Q14254 428 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 SLC1A5Q15758 541 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 BSXQ3C1V8 233 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 CCNJQ5T5M9 372 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 RESP18Q5W5W9 173 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 TMEM179Q6ZVK1 233 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 USP43Q70EL4 1123 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 MRPL55Q7Z7F7 128 aaKnown RBP3.77□□□□□ -1.81
LSM5-205ENST00000409952 FAM71AQ8IYT1 594 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 LRRC52Q8N7C0 313 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 OR6Q1Q8NGQ2 317 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 OR5AK3PQ8NH89 298 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 MCOLN3Q8TDD5 553 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 DOK4Q8TEW6 326 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 TMEM234Q8WY98 164 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 ADTRPQ96IZ2 230 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 C18orf12Q96KH6 178 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 APOL2Q9BQE5 337 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 ZNF426Q9BUY5 554 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 TRIM15Q9C019 465 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 SRMSQ9H3Y6 488 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 HEXA-AS1Q9H8Q6 139 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 UGT1A7Q9HAW7 530 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 UGT1A8Q9HAW9 530 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms