RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 CYC1P08574 325 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ETV4P43268 484 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PIN1Q13526 163 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF684Q5T5D7 378 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ANKRD16Q6P6B7 361 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PODNL1Q6PEZ8 512 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 IL17RDQ8NFM7 739 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR8B3Q8NGG8 313 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR8B2Q96RD0 313 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 GNB4Q9HAV0 340 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 MYOZ1Q9NP98 299 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FBXO34Q9NWN3 711 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TRAV18A0A075B6X5 111 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 A0A096LPE4 126 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 A0A1W2PPZ6 126 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 HELTA6NFD8 242 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 F6UZH7 168 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 H7BYZ3 331 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 GSTP1P09211 210 aaKnown RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 RHCEP18577 417 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CTSSP25774 331 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 RPL29P47914 159 aaKnown RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR2B8PP59922 312 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 UFM1P61960 85 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR51L1Q8NGJ5 315 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 APIPQ96GX9 242 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SIGLEC10Q96LC7 697 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 INTS14Q96SY0 518 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 BABAM2Q9NXR7 383 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 LOC102723971A0A1B0GUV8 181 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 MED19A0JLT2 244 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 A8MVM7 634 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 NXPH2O95156 264 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SERPINE2P07093 398 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 STSP08842 583 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 EPHA1P21709 976 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PSMB3P49720 205 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ASCL1P50553 236 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ATP1B3P54709 279 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 KRTDAPP60985 99 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ARL16Q0P5N6 197 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ADGRF3Q8IZF5 1079 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SLC38A6Q8IZM9 456 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR5AS1Q8N127 324 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR6V1Q8N148 313 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR2M7Q8NG81 312 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PTPMT1Q8WUK0 201 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CCL17Q92583 94 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 MRGPRX4Q96LA9 322 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PKMYT1Q99640 499 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CCM2LQ9NUG4 571 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ADAMTS7Q9UKP4 1686 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TRBV2A0A0J9YWF9 115 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 MSTNO14793 375 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FABP7O15540 132 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ANKRD34CP0C6C1 535 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR5H8P0DN80 308 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CTRB1P17538 263 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PTGER1P34995 402 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 HIST1H3AP68431 136 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SPCS2Q15005 226 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CTRB2Q6GPI1 263 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FRMPD2BQ6IN97 320 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 LCN10Q6JVE6 187 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TMEM65Q6PI78 240 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TOMM20LQ6UXN7 152 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TMEM135Q86UB9 458 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 OR13C5Q8NGS8 318 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 GIMAP1Q8WWP7 306 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 REEP6Q96HR9 211 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 RTL8AQ9BWD3 113 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SIAEQ9HAT2 523 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 C12orf10Q9HB07 376 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 A0A087X0M5 115 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 A0A1B0GX30 115 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FRG2CA6NGY1 282 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 NDUFB2O95178 105 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SLC2A1P11166 492 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TACR1P25103 407 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CSRP3P50461 194 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 IGFBP7Q16270 282 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 HAGHQ16775 308 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 CYBRD1Q53TN4 286 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TECRLQ5HYJ1 363 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 PLAG1Q6DJT9 500 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 METAP1DQ6UB28 335 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 Q6ZNX1 250 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF573Q86YE8 665 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FDCSPQ8NFU4 85 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 TMEM19Q96HH6 336 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FAM71F1Q96KD3 344 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FAM234AQ9H0X4 552 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ARV1Q9H2C2 271 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 SLC39A9Q9NUM3 307 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 LAMP3Q9UQV4 416 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 DICER1Q9UPY3 1922 aaKnown RBP6.61□□□□□ -1.35
SCN9A-202ENST00000409435 OR5H14A6NHG9 310 aa6.61□□□□□ -1.35
SCN9A-202ENST00000409435 OR5H1A6NKK0 313 aa6.61□□□□□ -1.35
SCN9A-202ENST00000409435 SYT7O43581 403 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms