RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 OR10H4Q8NGA5 316 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 OR10S1Q8NGN2 331 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 OR1F12Q8NHA8 337 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 FOXN4Q96NZ1 517 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 ESRP2Q9H6T0 727 aaKnown RBP11.33□□□□□ -0.6
LIMS2-203ENST00000409254 AMBNQ9NP70 447 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 AASSQ9UDR5 926 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 KCNN3Q9UGI6 736 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF391Q9UJN7 358 aa11.33□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF503-AS2A6NEH8 195 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ABHD16AO95870 558 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 THBDP07204 575 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 LIMS3P0CW19 117 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 LIMS4P0CW20 117 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 PSKH1P11801 424 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 STOMP27105 288 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 HTR5AP47898 357 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 MMP16P51512 607 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 RIDAP52758 137 aaKnown RBP11.32□□□□□ -0.6
LIMS2-203ENST00000409254 TPTEP56180 551 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 TAS2R43P59537 309 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 PSMA6P60900 246 aaKnown RBP11.32□□□□□ -0.6
LIMS2-203ENST00000409254 IRF3Q14653 427 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF829Q3KNS6 432 aaPredicted RBP11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 FDX2Q6P4F2 183 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 B3GLCTQ6Y288 498 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF584Q8IVC4 421 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 LINC00346Q8IVM7 164 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 POM121L2Q96KW2 1035 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF649Q9BS31 505 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 OPA3Q9H6K4 179 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 PAK1IP1Q9NWT1 392 aaPredicted RBP11.32□□□□□ -0.6
LIMS2-203ENST00000409254 COPS3Q9UNS2 423 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
LIMS2-203ENST00000409254 ASH1LQ9NR48 2969 aaKnown RBP11.31□□□□□ -0.6
LIMS2-203ENST00000409254 METTL15A6NJ78 407 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 PYCARD-AS1I3L0S3 204 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 M0R135 149 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 CASKO14936 926 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 MYL12BO14950 172 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 CRYAAP02489 173 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 MT-ND5P03915 603 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 H2BFMP0C1H6 154 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 CECR9P0C854 216 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 GRNP28799 593 aaKnown RBP11.31□□□□□ -0.6
LIMS2-203ENST00000409254 HSD11B1P28845 292 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 KIR2DL3P43628 341 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 GDI2P50395 445 aaKnown RBP11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF85Q03923 595 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ACSM1Q08AH1 577 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 DAZAP2Q15038 168 aaPredicted RBP11.31□□□□□ -0.6
LIMS2-203ENST00000409254 TSC22D1Q15714 1073 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 CCDC58Q4VC31 144 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 COLCA1Q6ZS62 124 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 KRT77Q7Z794 578 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
LIMS2-203ENST00000409254 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 SLC30A7Q8NEW0 376 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 OR52H1Q8NGJ2 320 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 FGFBP3Q8TAT2 258 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 DOK1Q99704 481 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ALG8Q9BVK2 526 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 NOX3Q9HBY0 568 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ISYNA1Q9NPH2 558 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 KLHDC2Q9Y2U9 406 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 LRP12Q9Y561 859 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 ARFGEF3Q5TH69 2177 aa11.31□□□□□ -0.6
LIMS2-203ENST00000409254 LRBAP50851 2863 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF35P13682 527 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 EEF1B2P24534 225 aaKnown RBP11.3□□□□□ -0.6
LIMS2-203ENST00000409254 CD40P25942 277 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 RPS27P42677 84 aaKnown RBP11.3□□□□□ -0.6
LIMS2-203ENST00000409254 TGM4P49221 684 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 IDH3GP51553 393 aaPredicted RBP11.3□□□□□ -0.6
LIMS2-203ENST00000409254 WNT4P56705 351 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 RPS23P62266 143 aaKnown RBP11.3□□□□□ -0.6
LIMS2-203ENST00000409254 TUBA4AP68366 448 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 NAAAQ02083 359 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 RAB39AQ14964 217 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 TAF13Q15543 124 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF485Q8NCK3 441 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 CPEB3Q8NE35 698 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms