RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SOX7Q9BT81 388 aa7.72□□□□□ -1.17
SNORD88A-201ENST00000408314 HCAR1Q9BXC0 346 aa7.72□□□□□ -1.17
SNORD88A-201ENST00000408314 REEP1Q9H902 201 aa7.72□□□□□ -1.17
SNORD88A-201ENST00000408314 TREM2Q9NZC2 230 aa7.72□□□□□ -1.17
SNORD88A-201ENST00000408314 IL19Q9UHD0 177 aa7.72□□□□□ -1.17
SNORD88A-201ENST00000408314 IL20RAQ9UHF4 553 aa7.72□□□□□ -1.17
SNORD88A-201ENST00000408314 IGLV1-36A0A0B4J1U3 117 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 B2RBV5 119 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 FOXH1O75593 365 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 UBOX5O94941 541 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 CCNB2O95067 398 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 MPZL1O95297 269 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 FAM107AO95990 144 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 IFNGP01579 166 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 IGHV2-5P01817 119 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 HLA-DQA2P01906 255 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 HIST1H1CP16403 213 aaKnown RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 ZNF823P16415 610 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 CDKN2AP42771 156 aaKnown RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 MAGEA2P43356 314 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 SRP9P49458 86 aaKnown RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 HMGA2P52926 109 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 TPTEP56180 551 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 FXYD6P3P58550 94 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 LMO4P61968 165 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 HIST1H3AP68431 136 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 CCDC92Q53HC0 331 aaPredicted RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 AVPI1Q5T686 147 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 HIST2H3PS2Q5TEC6 136 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 LCN8Q6JVE9 175 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 PGBD2Q6P3X8 592 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 FBXW12Q6X9E4 464 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 RASSF6Q6ZTQ3 369 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 PTCHD4Q6ZW05 846 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 HIST2H3AQ71DI3 136 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 ZBTB46Q86UZ6 589 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 C1orf87Q8N0U7 546 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 MUC20Q8N307 709 aaPredicted RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 SLC26A10Q8NG04 563 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 OR2Z1Q8NG97 314 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 OR13G1Q8NGZ3 307 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 OR4K13Q8NH42 304 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 SPTSSAQ969W0 71 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 CMBLQ96DG6 245 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 SAMD8Q96LT4 415 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 ZNF582Q96NG8 517 aaPredicted RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 JMJD8Q96S16 334 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 CCT8L2Q96SF2 557 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 PITX2Q99697 317 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 ATF6BQ99941 703 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 MSL2Q9HCI7 577 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 RPRD1BQ9NQG5 326 aaKnown RBP7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 TBC1D23Q9NUY8 699 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 KLHL21Q9UJP4 597 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 PCDHB10Q9UN67 800 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 B9D1Q9UPM9 204 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 PPP1R3CQ9UQK1 317 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 LYVE1Q9Y5Y7 322 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 NPTNQ9Y639 398 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 LHFPL6Q9Y693 200 aa7.71□□□□□ -1.18
SNORD88A-201ENST00000408314 PPIAL4EA0A075B759 164 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 PPIAL4CA0A0B4J2A2 164 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 LRRC30A6NM36 301 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 FAM157AC9JC47 383 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 PPIAL4DF5H284 164 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 RER1O15258 196 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 SCG5P05408 212 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 PPIAL4FP0DN26 164 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 RAD23AP54725 363 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 TRIM25Q14258 630 aaKnown RBP7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 TMEM155Q4W5P6 130 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 DCAF12L2Q5VW00 463 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 FAHD2BQ6P2I3 314 aaPredicted RBP7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 CYP2R1Q6VVX0 501 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 PHC2Q8IXK0 858 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 OR6V1Q8N148 313 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 ZNF283Q8N7M2 679 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 ATG16L2Q8NAA4 619 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 SDR9C7Q8NEX9 313 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 PROKR2Q8NFJ6 384 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 OR2T33Q8NG76 320 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 OR8G5Q8NG78 346 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 OR52E2Q8NGJ4 325 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 ZFAND2BQ8WV99 257 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 GTF3AQ92664 365 aaKnown RBP7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 ASB9Q96DX5 294 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 FAHD2AQ96GK7 314 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 GPA33Q99795 319 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 SLC22A4Q9H015 551 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 OPA3Q9H6K4 179 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 METTL17Q9H7H0 456 aaPredicted RBP7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 LPAR2Q9HBW0 351 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 SRA1Q9HD15 236 aaKnown RBP7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 TMEM106BQ9NUM4 274 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 IL20Q9NYY1 176 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 PTTG3PQ9NZH4 202 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 STARD10Q9Y365 291 aa7.7□□□□□ -1.18
SNORD88A-201ENST00000408314 SAMHD1Q9Y3Z3 626 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms