RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 SPI1P17947 270 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
VPREB3-202ENST00000398465 ACHEP22303 614 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 MPV17P39210 176 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 ERFP50548 548 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 MMP15P51511 669 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 OTPQ5XKR4 325 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 FAHD1Q6P587 224 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 TMEM154Q6P9G4 183 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.91□□□□□ -0.66
VPREB3-202ENST00000398465 LINC00346Q8IVM7 164 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 HS3ST5Q8IZT8 346 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 PARP8Q8N3A8 854 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 MAPK1IP1LQ8NDC0 245 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 OR9Q1Q8NGQ5 310 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 OR2AJ1Q8NGZ0 328 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 APOBEC3DQ96AK3 386 aaPredicted RBP10.91□□□□□ -0.66
VPREB3-202ENST00000398465 DIRC2Q96SL1 478 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 NTN4Q9HB63 628 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 SLC25A19Q9HC21 320 aa10.91□□□□□ -0.66
VPREB3-202ENST00000398465 PNRC2Q9NPJ4 139 aaKnown RBP10.91□□□□□ -0.66
VPREB3-202ENST00000398465 HPXP02790 462 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 TACSTD2P09758 323 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 KITLGP21583 273 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 FASP25445 335 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 FMO3P31513 532 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 PYCR1P32322 319 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 ENTPD1P49961 510 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 ZNF81P51508 661 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 RIN1Q13671 783 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 CCNIQ14094 377 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 GGTLC2Q14390 218 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 CARTPTQ16568 116 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 PCK2Q16822 640 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 TMEM255AQ5JRV8 349 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 CORO6Q6QEF8 472 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 CCDC121Q6ZUS5 278 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 HIPK1Q86Z02 1210 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 IQCF1Q8N6M8 205 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 OR5K1Q8NHB7 308 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 RDH5Q92781 318 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 PITX2Q99697 317 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 GABARAPL1Q9H0R8 117 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 PAPOLBQ9NRJ5 636 aaKnown RBP10.9□□□□□ -0.66
VPREB3-202ENST00000398465 ZDHHC8Q9ULC8 765 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 GRIP1Q9Y3R0 1128 aa10.9□□□□□ -0.66
VPREB3-202ENST00000398465 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
VPREB3-202ENST00000398465 SURF4O15260 269 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 PRODHO43272 600 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 TIMM8AO60220 97 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-202ENST00000398465 RP2O75695 350 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 HMGN1P05114 100 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 CD55P08174 381 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 DBHP09172 617 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 ZNF23P17027 643 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 OTX1P32242 354 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-202ENST00000398465 MAGEB1P43366 347 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 GZMKP49863 264 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 CHN2P52757 468 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 PPP2R2BQ00005 443 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 CDK5Q00535 292 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 DBPQ10586 325 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-202ENST00000398465 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 C6orf52Q5T4I8 152 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 LINC01590Q5TEZ4 76 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 COLCA1Q6ZS62 124 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-202ENST00000398465 OR5L1Q8NGL2 311 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 OR6K6Q8NGW6 343 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 SLC7A6Q92536 515 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 POM121Q96HA1 1249 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 C1QTNF5Q9BXJ0 243 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 PRRG3Q9BZD7 231 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 ENOPH1Q9UHY7 261 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 AP4S1Q9Y587 144 aa10.89□□□□□ -0.67
VPREB3-202ENST00000398465 IGHV4-61A0A0C4DH41 118 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 TVP23AA6NH52 213 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 ZSCAN5BA6NJL1 495 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 IGHV1-46P01743 117 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 GYPBP06028 91 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 SPARCP09486 303 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 ACSM4P0C7M7 580 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 CLUP10909 449 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 RAC2P15153 192 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
VPREB3-202ENST00000398465 POU1F1P28069 291 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 PSG7Q13046 419 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 GINS1Q14691 196 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 MALRD1Q5VYJ5 2156 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 LYPD4Q6UWN0 246 aa10.88□□□□□ -0.67
VPREB3-202ENST00000398465 ZDHHC13Q8IUH4 622 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms