RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-206ENST00000395795 ITLN1Q8WWA0 313 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 PTP4A1Q93096 173 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 RAB39BQ96DA2 213 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 FAHD2AQ96GK7 314 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 NSMCE2Q96MF7 247 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 COQ7Q99807 217 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 BTBD10Q9BSF8 475 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 TMEM106BQ9NUM4 274 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 MRPL22Q9NWU5 206 aaKnown RBP13.63□□□□□ -0.23
CXCL12-206ENST00000395795 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 NPTNQ9Y639 398 aa13.63□□□□□ -0.23
CXCL12-206ENST00000395795 F5H0A9 414 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-206ENST00000395795 J3QW42 95 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 FABP3P05413 133 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 CRABP1P29762 137 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 SLC6A6P31641 620 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 MAGEA2P43356 314 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 SMIM11AP58511 58 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 SEC61A1P61619 476 aaKnown RBP13.62□□□□□ -0.23
CXCL12-206ENST00000395795 GNGT1P63211 74 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 ZMYND11Q15326 602 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 LIPNQ5VXI9 398 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 LEG1Q6P5S2 330 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 ARL9Q6T311 187 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-206ENST00000395795 C1QL2Q7Z5L3 287 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 CPLX4Q7Z7G2 160 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 DEFB107AQ8IZN7 70 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 OR2Z1Q8NG97 314 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 OR8D4Q8NGM9 314 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 OR10S1Q8NGN2 331 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 TIMD4Q96H15 378 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 DCLRE1CQ96SD1 692 aaKnown RBP13.62□□□□□ -0.23
CXCL12-206ENST00000395795 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 NDEL1Q9GZM8 345 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 EGLN1Q9GZT9 426 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 FN3KQ9H479 309 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 SRA1Q9HD15 236 aaKnown RBP13.62□□□□□ -0.23
CXCL12-206ENST00000395795 VNN3Q9NY84 501 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 CYB5R1Q9UHQ9 305 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 POLR3KQ9Y2Y1 108 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-206ENST00000395795 LYVE1Q9Y5Y7 322 aa13.62□□□□□ -0.23
CXCL12-206ENST00000395795 H0YL77 283 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 BHLHE40O14503 412 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 MLNRO43193 412 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 OR10H3O60404 316 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 ANPEPP15144 967 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 ADRA2CP18825 462 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 PMELP40967 661 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 PRSS12P56730 875 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 TSPAN31Q12999 210 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 KRT72Q14CN4 511 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 ZMAT1Q5H9K5 638 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 OR2T2Q6IF00 324 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 NAA40Q86UY6 237 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 LRRC28Q86X40 367 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-206ENST00000395795 LINC00346Q8IVM7 164 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 ZDHHC21Q8IVQ6 265 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 OR5AS1Q8N127 324 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 FITM2Q8N6M3 262 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 OR9Q2Q8NGE9 314 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 MAP6Q96JE9 813 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 GAL3ST1Q99999 423 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 C1QTNF5Q9BXJ0 243 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
CXCL12-206ENST00000395795 HDHD2Q9H0R4 259 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 EGLN3Q9H6Z9 239 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 GCM1Q9NP62 436 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
CXCL12-206ENST00000395795 MMP26Q9NRE1 261 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 PTTG3PQ9NZH4 202 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
CXCL12-206ENST00000395795 C5orf63A6NC05 138 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 TRAPPC2LH3BP13 241 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 IDH3BO43837 385 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 ACSM4P0C7M7 580 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 RGS6P49758 472 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 MMP16P51512 607 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 SLC3A1Q07837 685 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 SPATS1Q496A3 300 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 PGM2L1Q6PCE3 622 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 LYPD4Q6UWN0 246 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-206ENST00000395795 DEFB108BQ8NET1 73 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 SDR9C7Q8NEX9 313 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 GJC3Q8NFK1 279 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 OR8G5Q8NG78 346 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 APOBEC3DQ96AK3 386 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-206ENST00000395795 OR2V2Q96R30 315 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 SLC30A2Q9BRI3 323 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 IFT27Q9BW83 186 aa13.6□□□□□ -0.23
CXCL12-206ENST00000395795 PATZ1Q9HBE1 687 aaKnown RBP13.6□□□□□ -0.23
CXCL12-206ENST00000395795 KRCC1Q9NPI7 259 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-206ENST00000395795 PPIAL4EA0A075B759 164 aa13.59□□□□□ -0.23
CXCL12-206ENST00000395795 A0A0A6YYJ9 748 aa13.59□□□□□ -0.23
CXCL12-206ENST00000395795 PPIAL4CA0A0B4J2A2 164 aa13.59□□□□□ -0.23
CXCL12-206ENST00000395795 A0A0G2JMP0 313 aa13.59□□□□□ -0.23
CXCL12-206ENST00000395795 A0A0X1KG70 313 aa13.59□□□□□ -0.23
CXCL12-206ENST00000395795 IQCF6A8MYZ5 107 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms