RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RBMS2Q15434 407 aaKnown RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 PMS2CLQ68D20 193 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 KCTD18Q6PI47 426 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 GABRG1Q8N1C3 465 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 MRGPRX4Q96LA9 322 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 TINAGL1Q9GZM7 467 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 NDEL1Q9GZM8 345 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 GDF2Q9UK05 429 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-202ENST00000394888 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
CPSF7-202ENST00000394888 SSX5O60225 188 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 SIX6O95475 246 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 CDAP32320 146 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 DAP3P51398 398 aaKnown RBP13.65□□□□□ -0.23
CPSF7-202ENST00000394888 TLE3Q04726 772 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 PEAR1Q5VY43 1037 aaPredicted RBP13.65□□□□□ -0.23
CPSF7-202ENST00000394888 LRFN4Q6PJG9 635 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 OR5AS1Q8N127 324 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 MYEF2Q9P2K5 600 aaKnown RBP13.65□□□□□ -0.23
CPSF7-202ENST00000394888 B3GALT5Q9Y2C3 310 aa13.65□□□□□ -0.23
CPSF7-202ENST00000394888 ANGPT1Q15389 498 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 GRK1Q15835 563 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 PTX4Q96A99 478 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 CMBLQ96DG6 245 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 RADILQ96JH8 1075 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 DPCDQ9BVM2 203 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-202ENST00000394888 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 A0A1W2PNR3 127 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 CSF1P09603 554 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 PMPCAQ10713 525 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 FAM209AQ5JX71 171 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 OR8H1Q8NGG4 311 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 ZMAT3Q9HA38 289 aaKnown RBP13.64□□□□□ -0.23
CPSF7-202ENST00000394888 MYO7BQ6PIF6 2116 aa13.64□□□□□ -0.23
CPSF7-202ENST00000394888 MCRIP1C9JLW8 97 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 MASP2O00187 686 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 RBBP9O75884 186 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 HLA-BQ31612 363 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ADGRE4PQ86SQ3 457 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 OR6M1Q8NGM8 313 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 OR13C3Q8NGS6 347 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 HLA-CQ95604 372 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 IMMP1LQ96LU5 166 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ZNF69Q9UC07 566 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 TMEM269A0A1B0GVZ9 245 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 MEN1O00255 615 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 TSC22D2O75157 780 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 FGF5P12034 268 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ZNF81P51508 661 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 SSBP1Q04837 148 aaKnown RBP13.63□□□□□ -0.23
CPSF7-202ENST00000394888 KCNMB1Q16558 191 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 FTMTQ8N4E7 242 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 TMEM229BQ8NBD8 167 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 NOXO1Q8NFA2 376 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 DDIT4LQ96D03 193 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 GINS4Q9BRT9 223 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ATG5Q9H1Y0 275 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ANAPC10Q9UM13 185 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 HHLA2Q9UM44 414 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 DCDC2BA2VCK2 349 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 CPED1A4D0V7 1026 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 PDGFBP01127 241 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-202ENST00000394888 EMP2P54851 167 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ACY1Q03154 408 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ESCO2Q56NI9 601 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 TOR2AQ5JU69 321 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 ANGPTL6Q8NI99 470 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 CHIAQ9BZP6 476 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 PBOV1Q9GZY1 135 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 PRDM6Q9NQX0 595 aa13.63□□□□□ -0.23
CPSF7-202ENST00000394888 IGHV1-45A0A0A0MS14 117 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 NPIPA5E9PKD4 350 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 NTN3O00634 580 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-202ENST00000394888 LPLP06858 475 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 VSIG8P0DPA2 414 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 SRSF4Q08170 494 aaKnown RBP13.62□□□□□ -0.23
CPSF7-202ENST00000394888 POU4F3Q15319 338 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 STEAP1BQ6NZ63 245 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 LYZL4Q96KX0 146 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 SLC6A7Q99884 636 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 ALX4Q9H161 411 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-202ENST00000394888 STMN3Q9NZ72 180 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 NPIPA1Q9UND3 350 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 KMT2EQ8IZD2 1858 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 FOXI3A8MTJ6 420 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-202ENST00000394888 MSTNO14793 375 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 COX6A1P12074 109 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 CCL1P22362 96 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 CLLU1Q5K131 121 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 C15orf40Q8WUR7 153 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 MARVELD3Q96A59 401 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 FGGYQ96C11 551 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 TMEM185BQ9H7F4 350 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 MYOZ1Q9NP98 299 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-202ENST00000394888 RPH3AQ9Y2J0 694 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-202ENST00000394888 M0QYG6 137 aa13.62□□□□□ -0.23
CPSF7-202ENST00000394888 AKAIN1P0CW23 69 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms