RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.24
CCDC50-201ENST00000392455 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.24
CCDC50-201ENST00000392455 DCDP81605 110 aaKnown RBP13.52□□□□□ -0.24
CCDC50-201ENST00000392455 ILKQ13418 452 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 DOC2BQ14184 412 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 IGFBP7Q16270 282 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 HYAL4Q2M3T9 481 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 MAML2Q8IZL2 1156 aaPredicted RBP13.52□□□□□ -0.24
CCDC50-201ENST00000392455 WBP2Q969T9 261 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 C1QBP02746 253 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 CD226Q15762 336 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 TRAT1Q6PIZ9 186 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 DTWD1Q8N5C7 304 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 OR52R1Q8NGF1 315 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 ST8SIA4Q92187 359 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 TRAPPC1Q9Y5R8 145 aa13.52□□□□□ -0.24
CCDC50-201ENST00000392455 PTHLHP12272 177 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.25
CCDC50-201ENST00000392455 TP53INP2Q8IXH6 220 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 SLC39A13Q96H72 371 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 PMCHP20382 165 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 YPEL5P62699 121 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 IZUMO4Q1ZYL8 232 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 HSPB6O14558 160 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 PSMB10P40306 273 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 RELBQ01201 579 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 ETFDHQ16134 617 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 ARRDC3Q96B67 414 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 ULBP3Q9BZM4 244 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 CSAG2Q9Y5P2 127 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM265A0A087WTH1 108 aa13.52□□□□□ -0.25
CCDC50-201ENST00000392455 A0A0A6YYC8 382 aaPredicted RBP13.52□□□□□ -0.25
CCDC50-201ENST00000392455 I3L1I5 382 aaPredicted RBP13.52□□□□□ -0.25
CCDC50-201ENST00000392455 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF429Q86V71 674 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 FLVCR1Q9Y5Y0 555 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 GHRHP01286 108 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 C9orf152Q5JTZ5 239 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 GGNBP1Q5YKI7 109 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 MAMDC4Q6UXC1 1216 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 SCGB1D4Q6XE38 83 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM147Q9BVK8 224 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 GPR173Q9NS66 373 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 PMP2P02689 132 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 SLC10A3P09131 477 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 RGRP47804 291 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 LTC4SQ16873 150 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 SYT9Q86SS6 491 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 OR1L3Q8NH93 324 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 LCORQ96JN0 433 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 ANXA10Q9UJ72 324 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 OR5AL1P0C617 328 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 LIPCP11150 499 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 CD68P34810 354 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 GLYATL3Q5SZD4 288 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 Q8IYB0 196 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 EID2BQ96D98 161 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 FLVCR2Q9UPI3 526 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF865P0CJ78 1059 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 KIR2DL1P43626 348 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 KIR2DL2P43627 348 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 RBP2P50120 134 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 EMX1Q04741 257 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 TRMT12Q53H54 448 aaKnown RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 MRPL2Q5T653 305 aaKnown RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 OR5M10Q6IEU7 315 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 CLEC9AQ6UXN8 241 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 GPR32P1Q8NGA4 272 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 TTC9Q92623 222 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 M0R1X1 148 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 FRS3O43559 492 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 ELAVL4P26378 380 aaKnown RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 DLX1P56177 255 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 MRPS24Q96EL2 167 aaKnown RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 RNF2Q99496 336 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 IFT22Q9H7X7 185 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF140P52738 457 aaPredicted RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 TOR2AQ5JU69 321 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 SLC38A9Q8NBW4 561 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 OR52E1Q8NGJ3 308 aa13.51□□□□□ -0.25
CCDC50-201ENST00000392455 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
CCDC50-201ENST00000392455 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 GPR31O00270 319 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 HRASP01112 189 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 ACHEP22303 614 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 PTGER1P34995 402 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 VRK3Q8IV63 474 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 ARHGEF39Q8N4T4 335 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 OR5A2Q8NGI9 324 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 P4HTMQ9NXG6 502 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 FOXJ3Q9UPW0 622 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms