RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CLEC4MQ9H2X3 399 aaPredicted RBP13.37□□□□□ -0.27
PDGFB-202ENST00000381551 CDH20Q9HBT6 801 aa13.37□□□□□ -0.27
PDGFB-202ENST00000381551 PLCXD1Q9NUJ7 323 aa13.37□□□□□ -0.27
PDGFB-202ENST00000381551 F5H5K5 113 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 DENRO43583 198 aaKnown RBP13.36□□□□□ -0.27
PDGFB-202ENST00000381551 ICMTO60725 284 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 PRF1P14222 555 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 OPRL1P41146 370 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 WNT5AP41221 380 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 UCP2P55851 309 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 NKX6-1P78426 367 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-202ENST00000381551 GALK2Q01415 458 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 RAB40BQ12829 278 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 KLHL22Q53GT1 634 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 KCTD18Q6PI47 426 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-202ENST00000381551 ASB17Q8WXJ9 295 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 C4orf45Q96LM5 186 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 DCLRE1CQ96SD1 692 aaKnown RBP13.36□□□□□ -0.27
PDGFB-202ENST00000381551 KCNJ15Q99712 375 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 PLEKHF2Q9H8W4 249 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 MYRFQ9Y2G1 1151 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 PCDHGB1Q9Y5G3 927 aa13.36□□□□□ -0.27
PDGFB-202ENST00000381551 A0A1W2PQL4 384 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 PRR32B1ATL7 298 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF878C9JN71 531 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 E7EQL1 145 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF670-ZNF695F2Z2N8 137 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 PHYHO14832 338 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 FADS2O95864 444 aaKnown RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 RAD52P43351 418 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 CXCR4P61073 352 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 CSNK2BP67870 215 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ROM1Q03395 351 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 TAF13Q15543 124 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF672Q499Z4 452 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 DEGS2Q6QHC5 323 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF322Q6U7Q0 402 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 NAA40Q86UY6 237 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF101Q8IZC7 436 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 RFLNBQ8N5W9 214 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 NUP37Q8NFH4 326 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 OR10H4Q8NGA5 316 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 OR52I1Q8NGK6 324 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 IPCEF1Q8WWN9 437 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 AKAP1Q92667 903 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 GGHQ92820 318 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 SPTSSAQ969W0 71 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 TBX5Q99593 518 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 COPS4Q9BT78 406 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 TBCCD1Q9NVR7 557 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 SLCO1C1Q9NYB5 712 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 CISD1Q9NZ45 108 aaKnown RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 EIF3KQ9UBQ5 218 aaKnown RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 GRIP1Q9Y3R0 1128 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 PCDHGB5Q9Y5G0 923 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ATP23Q9Y6H3 246 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 HRNRQ86YZ3 2850 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-202ENST00000381551 ROS1P08922 2347 aa13.35□□□□□ -0.27
PDGFB-202ENST00000381551 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 NGFP01138 241 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 H2BFMP0C1H6 154 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 ACSM4P0C7M7 580 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 FAM157BP0CG42 384 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 GLRXP35754 106 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 TPTEP56180 551 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 GRB2P62993 217 aaKnown RBP13.34□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF85Q03923 595 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 EGR3Q06889 387 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 KRT80Q6KB66 452 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 ARL9Q6T311 187 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 LRRN1Q6UXK5 716 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 SSX6Q7RTT6 188 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 KRT77Q7Z794 578 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 TMEM200AQ86VY9 491 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
PDGFB-202ENST00000381551 ZNF679Q8IYX0 411 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 ACBD7Q8N6N7 88 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 BPIFB6Q8NFQ5 453 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 CNBD2Q96M20 576 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 OR8B4Q96RC9 309 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 MROQ9BYG7 248 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 ELOVL3Q9HB03 270 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 FGF20Q9NP95 211 aaPredicted RBP13.34□□□□□ -0.27
PDGFB-202ENST00000381551 PSORS1C1Q9UIG5 152 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 POU2F3Q9UKI9 436 aa13.34□□□□□ -0.27
PDGFB-202ENST00000381551 M0R135 149 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 PSMD9O00233 223 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 MAGEB4O15481 346 aaPredicted RBP13.33□□□□□ -0.28
PDGFB-202ENST00000381551 SMPD2O60906 423 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 ZNF254O75437 659 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 IGHA1P01876 353 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 THBS4P35443 961 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 PRKXP51817 358 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 KRTAP10-9P60411 292 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 ACTC1P68032 377 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 ACTA1P68133 377 aa13.33□□□□□ -0.28
PDGFB-202ENST00000381551 SNTB2Q13425 540 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms