RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 VAMP1P23763 118 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 IGLV3-21P80748 117 aaPredicted RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 SERTAD2Q14140 314 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 INPP5JQ15735 1006 aaPredicted RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 RAB12Q6IQ22 244 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 LYG2Q86SG7 212 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 ADGRE4PQ86SQ3 457 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 FJX1Q86VR8 437 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 ADAD2Q8NCV1 583 aaKnown RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 OR5T2Q8NGG2 359 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 PAQR8Q8TEZ7 354 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 MMABQ96EY8 250 aaPredicted RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 CHRDQ9H2X0 955 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF768Q9H5H4 540 aaKnown RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 SCPEP1Q9HB40 452 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 MYOZ1Q9NP98 299 aaPredicted RBP12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 C13orf42A0A1B0GVH6 325 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 CPED1A4D0V7 1026 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 PRAMEF26H0Y7S4 382 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 HCRTR2O43614 444 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 BGLAPP02818 100 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 AKR1C4P17516 323 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 CXCR1P25024 350 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 PRKXP51817 358 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 IL13RA1P78552 427 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 BIKQ13323 160 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 VWA2Q5GFL6 755 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 TMEM71Q6P5X7 295 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 SLC25A42Q86VD7 318 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 CATSPERDQ86XM0 798 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 KDM8Q8N371 416 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 FAM46BQ96A09 425 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 NUDT9Q9BW91 350 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 SEMA6CQ9H3T2 930 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 PNO1Q9NRX1 252 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 MLXQ9UH92 298 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 A0A1W2PPC4 97 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 NUDT14O95848 222 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 RIDAP52758 137 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF117Q03924 483 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 RNASE10Q5GAN6 216 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 ARMC6Q6NXE6 501 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 TRAPPC6BQ86SZ2 158 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 INO80EQ8NBZ0 244 aaPredicted RBP12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 THAP6Q8TBB0 222 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 NUDCD2Q8WVJ2 157 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 ADAM19Q9H013 955 aa12.64□□□□□ -0.39
CLCNKA-202ENST00000375692 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 IGLV1-36A0A0B4J1U3 117 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF98A6NK75 572 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 TNFRSF10CO14798 259 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 LDLRAD4O15165 306 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ICOSLGO75144 302 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ACTL6AO96019 429 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ERCC1P07992 297 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 THEGLP0DJG4 465 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 PGAM2P15259 253 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 BCKDHBP21953 392 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 CD96P40200 585 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 CCR5P51681 352 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 CTAG1AP78358 180 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 TOMM20Q15388 145 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 HAGHLQ6PII5 290 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 C19orf47Q8N9M1 422 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 OR5AP2Q8NGF4 316 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ASB17Q8WXJ9 295 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 PHYHIPLQ96FC7 376 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF587Q96SQ5 575 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 OR8D2Q9GZM6 311 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 HS3ST3A1Q9Y663 406 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 HSPB2A8KAH6 182 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF217O75362 1048 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 HSPB2Q16082 182 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 HFEQ30201 348 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 PLEKHN1Q494U1 663 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 CCDC36Q8IYA8 594 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 GTPBP8Q8N3Z3 284 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 SELENOIQ9C0D9 397 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 SLCO5A1Q9H2Y9 848 aa12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 COA3Q9Y2R0 106 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-202ENST00000375692 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms