RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZNF283Q8N7M2 679 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 ATG16L2Q8NAA4 619 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 ZFAND2BQ8WV99 257 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 ITLN1Q8WWA0 313 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 CDRT15Q96T59 188 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 NMNAT3Q96T66 252 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 OR52D1Q9H346 318 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 PTTG3PQ9NZH4 202 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 CD300AQ9UGN4 299 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 ATPIF1Q9UII2 106 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 MAGEL2Q9UJ55 1249 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 PPP1R3CQ9UQK1 317 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 LHFPL6Q9Y693 200 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 IGLV1-36A0A0B4J1U3 117 aa12□□□□□ -0.49
NELFE-201ENST00000375425 J3QW42 95 aa12□□□□□ -0.49
NELFE-201ENST00000375425 ARPC3O15145 178 aa12□□□□□ -0.49
NELFE-201ENST00000375425 SURF4O15260 269 aa12□□□□□ -0.49
NELFE-201ENST00000375425 OR10H3O60404 316 aa12□□□□□ -0.49
NELFE-201ENST00000375425 HIST1H1CP16403 213 aaKnown RBP12□□□□□ -0.49
NELFE-201ENST00000375425 HIST1H3AP68431 136 aa12□□□□□ -0.49
NELFE-201ENST00000375425 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
NELFE-201ENST00000375425 HIST2H3PS2Q5TEC6 136 aa12□□□□□ -0.49
NELFE-201ENST00000375425 OR2T2Q6IF00 324 aa12□□□□□ -0.49
NELFE-201ENST00000375425 CORO6Q6QEF8 472 aa12□□□□□ -0.49
NELFE-201ENST00000375425 HIST2H3AQ71DI3 136 aa12□□□□□ -0.49
NELFE-201ENST00000375425 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
NELFE-201ENST00000375425 JAZF1Q86VZ6 243 aa12□□□□□ -0.49
NELFE-201ENST00000375425 LRRC28Q86X40 367 aaPredicted RBP12□□□□□ -0.49
NELFE-201ENST00000375425 OR5L1Q8NGL2 311 aa12□□□□□ -0.49
NELFE-201ENST00000375425 OR4K13Q8NH42 304 aa12□□□□□ -0.49
NELFE-201ENST00000375425 FANK1Q8TC84 345 aa12□□□□□ -0.49
NELFE-201ENST00000375425 MCUR1Q96AQ8 359 aa12□□□□□ -0.49
NELFE-201ENST00000375425 OR2V2Q96R30 315 aa12□□□□□ -0.49
NELFE-201ENST00000375425 COQ7Q99807 217 aa12□□□□□ -0.49
NELFE-201ENST00000375425 IFT27Q9BW83 186 aa12□□□□□ -0.49
NELFE-201ENST00000375425 OPN4Q9UHM6 478 aa12□□□□□ -0.49
NELFE-201ENST00000375425 WNK2Q9Y3S1 2297 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 FOXH1O75593 365 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 RENP00797 406 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 FABP3P05413 133 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 FPR3P25089 353 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 NOS3P29474 1203 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 RRM2P31350 389 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 SLC6A6P31641 620 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 HILS1P60008 231 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 COX10Q12887 443 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 SAMD4BQ5PRF9 694 aaKnown RBP11.99□□□□□ -0.49
NELFE-201ENST00000375425 PGM2L1Q6PCE3 622 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 FBXW12Q6X9E4 464 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 PGAM4Q8N0Y7 254 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 KLHL36Q8N4N3 616 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 SPICQ8N5J4 248 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
NELFE-201ENST00000375425 NSMCE2Q96MF7 247 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 SIGLEC11Q96RL6 698 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 NSRP1Q9H0G5 558 aaKnown RBP11.99□□□□□ -0.49
NELFE-201ENST00000375425 HDHD2Q9H0R4 259 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 PATZ1Q9HBE1 687 aaKnown RBP11.99□□□□□ -0.49
NELFE-201ENST00000375425 GCM1Q9NP62 436 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 IL1RAPQ9NPH3 570 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 RPRD1BQ9NQG5 326 aaKnown RBP11.99□□□□□ -0.49
NELFE-201ENST00000375425 MMP26Q9NRE1 261 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 ARHGAP32A7KAX9 2087 aa11.99□□□□□ -0.49
NELFE-201ENST00000375425 PPIAL4EA0A075B759 164 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 PPIAL4CA0A0B4J2A2 164 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 PPIAL4DF5H284 164 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 ARPC2O15144 300 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 PPIAL4FP0DN26 164 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 IFNGR2P38484 337 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 SLC6A9P48067 706 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 BTG1P62324 171 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 ZMYND11Q15326 602 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 SLC27A4Q6P1M0 643 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 LINC00346Q8IVM7 164 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 SLC26A10Q8NG04 563 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 OR13G1Q8NGZ3 307 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 ZNF582Q96NG8 517 aaPredicted RBP11.98□□□□□ -0.49
NELFE-201ENST00000375425 CDADC1Q9BWV3 514 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 WDR76Q9H967 626 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 ARL8BQ9NVJ2 186 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 TAGLN3Q9UI15 199 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 TMCC3Q9ULS5 477 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 TENM1Q9UKZ4 2725 aa11.98□□□□□ -0.49
NELFE-201ENST00000375425 OR6C68A6NDL8 312 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 H0YL77 283 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 TRAPPC2LH3BP13 241 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 TMEM178BH3BS89 294 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 IDH3BO43837 385 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 GSSP48637 474 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 GYS2P54840 703 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 SLC35F1Q5T1Q4 408 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 CFAP77Q6ZQR2 320 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 ZBTB46Q86UZ6 589 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 ZDHHC21Q8IVQ6 265 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 BPIFB2Q8N4F0 458 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 OR10AD1Q8NGE0 317 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms