RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 B9D1Q9UPM9 204 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ARID1AO14497 2285 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 A0A0B4J2A0 478 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 TXNDC12O95881 172 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 MAOAP21397 527 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ZBTB25P24278 435 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 TACR3P29371 465 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 NXPH1P58417 271 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 KLHL26Q53HC5 615 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 MED25Q71SY5 747 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF440Q8IYI8 595 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF679Q8IYX0 411 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 GVQW1Q8N7I0 195 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 AVL9Q8NBF6 648 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 TMED6Q8WW62 240 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 METTL21AQ8WXB1 218 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 DCUN1D4Q92564 292 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 RSC1A1Q92681 617 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 TAAR8Q969N4 342 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ARL11Q969Q4 196 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF524Q96C55 264 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SLC25A36Q96CQ1 311 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 FOXRED1Q96CU9 486 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF587Q96SQ5 575 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 TLNRD1Q9H1K6 362 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 OR10A5Q9H207 317 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SLCO5A1Q9H2Y9 848 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 FAM60AQ9NP50 221 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 BIN3Q9NQY0 253 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SHPKQ9UHJ6 478 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 A0A0J9YY10 115 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 C9orf170A2RU37 121 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 PDGFBP01127 241 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 H2AFB1P0C5Y9 115 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 CTSEP14091 401 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 AIMP2Q13155 320 aaKnown RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SLC22A6Q4U2R8 563 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SLC18B1Q6NT16 456 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ARMC10Q8N2F6 343 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 METTL27Q8N6F8 245 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 OR5AP2Q8NGF4 316 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 CMBLQ96DG6 245 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 CPNE2Q96FN4 548 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 PRRT1Q99946 306 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 MICU1Q9BPX6 476 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 CMSS1Q9BQ75 279 aaKnown RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 EDEM2Q9BV94 578 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SELENOIQ9C0D9 397 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 MYOZ1Q9NP98 299 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 PRTFDC1Q9NRG1 225 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 SLCO1B1Q9Y6L6 691 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 GON4LQ3T8J9 2241 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 FAM221BA6H8Z2 402 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 LAMTOR5O43504 91 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 SLC16A7O60669 478 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 EIF2B1Q14232 305 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 EMC4Q5J8M3 183 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 C1QL3Q5VWW1 255 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 TRAPPC6BQ86SZ2 158 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 FJX1Q86VR8 437 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 OR4K17Q8NGC6 315 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 FAM46BQ96A09 425 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 CSAG2Q9Y5P2 127 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 CPED1A4D0V7 1026 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 SCDO00767 359 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 STK17BO94768 372 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 CD74P04233 296 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 IFI6P09912 130 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 TPT1P13693 172 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 CFPP27918 469 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 NPBWR1P48145 328 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 KCNJ3P48549 501 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 RIDAP52758 137 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 MEF2DQ14814 521 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 SLC25A42Q86VD7 318 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 OOSP2Q86WS3 158 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 DEFB119Q8N690 84 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 OR13C3Q8NGS6 347 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 RNF128Q8TEB7 428 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 NUDCD2Q8WVJ2 157 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 CNTNAP3BQ96NU0 1288 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 TCEAL2Q9H3H9 227 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 CHMP1AQ9HD42 196 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 KIF26BQ2KJY2 2108 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 FANCMQ8IYD8 2048 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF705EA8MWA4 302 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 M0R296 226 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 FARS2O95363 451 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 ERCC1P07992 297 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 SPP1P10451 314 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 RFC3P40938 356 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 GPR3P46089 330 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 SRSF4Q08170 494 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 TOMM20Q15388 145 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 NKAPLQ5M9Q1 402 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 MARCH3Q86UD3 253 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 ADAD2Q8NCV1 583 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 OR10R2Q8NGX6 335 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms