RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ELFN2Q5R3F8 820 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 CORO6Q6QEF8 472 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 ZFP62Q8NB50 900 aaPredicted RBP11.08□□□□□ -0.64
PRPF4-202ENST00000374199 CPNE4Q96A23 557 aaPredicted RBP11.08□□□□□ -0.64
PRPF4-202ENST00000374199 FER1L6-AS2Q96M78 137 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 ACKR4Q9NPB9 350 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 MALT1Q9UDY8 824 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 A0A0A6YYH2 397 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 C7orf66A4D0T2 115 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 HMX3A6NHT5 357 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 A6NJ64 397 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 OPN1LWP04000 364 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 H2BFMP0C1H6 154 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 RAB6AP20340 208 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 HSD11B1P28845 292 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 DGCR2P98153 550 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 SSBP1Q04837 148 aaKnown RBP11.08□□□□□ -0.64
PRPF4-202ENST00000374199 PLA2G7Q13093 441 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 TAB1Q15750 504 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 BCL2L15Q5TBC7 163 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 FCRLAQ7L513 359 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 LIX1LQ8IVB5 337 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 SULF2Q8IWU5 870 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 CCDC54Q8NEL0 328 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 CPT1CQ8TCG5 803 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 ST6GAL2Q96JF0 529 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 TEKT2Q9UIF3 430 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 V9GYS6 101 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 LOC100289279A0A1B0GTE1 492 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 CTAG2O75638 210 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 WDPCPO95876 746 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 CDAP32320 146 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 CSNK1A1P48729 337 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 SPINK14Q6IE38 97 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 GPAT4Q86UL3 456 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 C19orf18Q8NEA5 215 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 UQCC2Q9BRT2 126 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF416Q9BWM5 594 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ANKRD20A5PA0PJZ0 165 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF726A6NNF4 738 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 DHHO43323 396 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ALDOBP05062 364 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 CST2P09228 141 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 SELENOPP49908 381 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 CAPZA1P52907 286 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ART1P52961 327 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 OR1C1Q15619 314 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 DNAAF1Q8NEP3 725 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 OR6M1Q8NGM8 313 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 OR10D3Q8NH80 312 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 FOXRED1Q96CU9 486 aaPredicted RBP11.07□□□□□ -0.64
PRPF4-202ENST00000374199 TTTY12Q9BZ98 90 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 MMP28Q9H239 520 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 TAS2R4Q9NYW5 299 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF319Q9P2F9 582 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 TNRC6AQ8NDV7 1962 aaKnown RBP11.07□□□□□ -0.64
PRPF4-202ENST00000374199 ORC5O43913 435 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 SOX2P48431 317 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 CARD18P57730 90 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
PRPF4-202ENST00000374199 SYNPRQ8TBG9 265 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 HAS2Q92819 552 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 PNPLA2Q96AD5 504 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 C10orf35Q96D05 121 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 BCO1Q9HAY6 547 aa11.07□□□□□ -0.64
PRPF4-202ENST00000374199 OR6C6A6NF89 314 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 DHRS7CA6NNS2 312 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 E9PLN8 166 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 CDK2P24941 298 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ALDH3B1P43353 468 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 AKAP14Q86UN6 197 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 GALNT16Q8N428 558 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 OR10H5Q8NGA6 315 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 OR1J2Q8NGS2 313 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 OR14L1PQ8NHC6 308 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 C1orf147Q96MC9 270 aaPredicted RBP11.06□□□□□ -0.64
PRPF4-202ENST00000374199 METTL17Q9H7H0 456 aaPredicted RBP11.06□□□□□ -0.64
PRPF4-202ENST00000374199 COPZ2Q9P299 210 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM272A0A1B0GTI8 110 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 A0A1W2PPL8 197 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 SYNGR3O43761 229 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 LMX1BO60663 402 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 SP1P08047 785 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF121P58317 390 aaPredicted RBP11.06□□□□□ -0.64
PRPF4-202ENST00000374199 OR8B12Q8NGG6 310 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 LYZL4Q96KX0 146 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ZDHHC11Q9H8X9 412 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM38BQ9NVV0 291 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF224Q9NZL3 707 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ASH2LQ9UBL3 628 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ATPIF1Q9UII2 106 aa11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF107Q9UII5 783 aaPredicted RBP11.06□□□□□ -0.64
PRPF4-202ENST00000374199 ANXA2P2A6NMY6 339 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF724A8MTY0 619 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 NPIPA2E9PIF3 369 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 NPIPA3F8WFD2 350 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 RER1O15258 196 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 EEF1E1O43324 174 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms