RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ALKBH6Q3KRA9 238 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 PRR14Q9BWN1 585 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 KRBOX1C9JBD0 128 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 FGF17O60258 216 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 H2AFB1P0C5Y9 115 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF620Q6ZNG0 422 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 LAMP3Q9UQV4 416 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 FRG2CA6NGY1 282 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 C2CD4DB7Z1M9 353 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 WBP2Q969T9 261 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 SEC22CQ9BRL7 303 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 SARGQ9BW04 601 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 STRAPQ9Y3F4 350 aaKnown RBP14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 IGHV3-15A0A0B4J1V0 119 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 TRAV17A0A0B4J275 112 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 RAF1P04049 648 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 MMP11P24347 488 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 FCER1GP30273 86 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 GPR3P46089 330 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 FZD2Q14332 565 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 NRG4Q8WWG1 115 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 MYOZ1Q9NP98 299 aaPredicted RBP14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 AK3Q9UIJ7 227 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 V9GYS6 101 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF785A8K8V0 405 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 T-ENOLP0DO92 83 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ALOX5APP20292 161 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 PNLIPRP2P54317 469 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 CCL7P80098 99 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 DOC2BQ14184 412 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OLIG3Q7RTU3 272 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 RETREG3Q86VR2 466 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 GNPNAT1Q96EK6 184 aaPredicted RBP14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 MRGPRX1Q96LB2 322 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 MKRN2Q9H000 416 aaKnown RBP14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 LTB4R2Q9NPC1 389 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF835Q9Y2P0 537 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 TRABD2BA6NFA1 517 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 MBP02144 154 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ST6GAL1P15907 406 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 DHODHQ02127 395 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 Q6ZSR9 355 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 BCDIN3DQ7Z5W3 292 aaKnown RBP14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OR52N5Q8NH56 324 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ST8SIA4Q92187 359 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OR13C7P0DN81 318 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC19A1P41440 591 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 RELAQ04206 551 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 VMA21Q3ZAQ7 101 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 FAM162BQ5T6X4 162 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 TMEM211Q6ICI0 200 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ARIH2OSQ8N7S6 290 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 TEAD3Q99594 435 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 POM121BA6NF01 834 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 LINC01387J3KSC0 135 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ABCD3P28288 659 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 CCR6P51684 374 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 EIF3IQ13347 325 aaKnown RBP14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OR11G2Q8NGC1 345 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 TAAR5O14804 337 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OR7C2O60412 319 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 S100A11P31949 105 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 RFC3P40938 356 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF90Q03938 601 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 EGR3Q06889 387 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 DUSP8Q13202 625 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OR1C1Q15619 314 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 AVPI1Q5T686 147 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 NKAIN4Q8IVV8 208 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 NHLRC2Q8NBF2 726 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 OR51S1Q8NGJ8 323 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ST8SIA2Q92186 375 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 GPR84Q9NQS5 396 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 GAR1Q9NY12 217 aaKnown RBP14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 ARFGEF2Q9Y6D5 1785 aa14.28□□□□□ -0.12
NUCKS1-201ENST00000367142 PATE1Q8WXA2 126 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 AQP7P3A6NL99 342 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 NUDT19A8MXV4 375 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 ADAM10O14672 748 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 HAAOP46952 286 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 OLIG1Q8TAK6 271 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC2A8Q9NY64 477 aa14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 GMPR2Q9P2T1 348 aaKnown RBP14.27□□□□□ -0.12
NUCKS1-201ENST00000367142 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 A0A1W2PR48 441 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 LRRC3CA6NJW4 275 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 HSPB2A8KAH6 182 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 GFYI3L273 518 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 FBP1P09467 338 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 SPP1P10451 314 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 SPI1P17947 270 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 PTBP1P26599 531 aaKnown RBP eCLIP14.27□□□□□ -0.137e-38■□□□□ 10.5
NUCKS1-201ENST00000367142 DSCR4P56555 118 aaPredicted RBP14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 DEFA6Q01524 100 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 HSPB2Q16082 182 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 HLA-BQ31612 363 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 DRAM2Q6UX65 266 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 NRARPQ7Z6K4 114 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 OR1J1Q8NGS3 322 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms