RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 C11orf88Q6PI97 169 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 METTL27Q8N6F8 245 aaPredicted RBP11.1□□□□□ -0.63
UBA3-202ENST00000361055 OR8S1Q8NH09 359 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 ZNF721Q8TF20 911 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 PTX4Q96A99 478 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 C1QTNF6Q9BXI9 259 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 RTN4RQ9BZR6 473 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 SLC25A32Q9H2D1 315 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 POFUT1Q9H488 388 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 TMEM82A0PJX8 343 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 MEIS3P1A6NDR6 274 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 ALG1L2C9J202 215 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 LDLRAD4O15165 306 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 NPIPB7O75200 414 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 SLC25A12O75746 678 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 TIAF1O95411 115 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 HPP00738 406 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 CD8AP01732 235 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 MGMTP16455 207 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 UBE2MP61081 183 aaKnown RBP11.1□□□□□ -0.63
UBA3-202ENST00000361055 SORDQ00796 357 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 EIF3IQ13347 325 aaKnown RBP11.1□□□□□ -0.63
UBA3-202ENST00000361055 TOMM34Q15785 309 aaPredicted RBP11.1□□□□□ -0.63
UBA3-202ENST00000361055 GLYATL3Q5SZD4 288 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 SLC35D2Q76EJ3 337 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 NDUFAF7Q7L592 441 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 RAB11FIP2Q7L804 512 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 DUSP19Q8WTR2 217 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 PPP1R14AQ96A00 147 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 PTDSS2Q9BVG9 487 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 OR8D2Q9GZM6 311 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 ZNF304Q9HCX3 659 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 LOXL2Q9Y4K0 774 aa11.1□□□□□ -0.63
UBA3-202ENST00000361055 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
UBA3-202ENST00000361055 FAM186AA6NE01 2351 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 SPAARA0A1B0GVQ0 90 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 A0A1B0GW55 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 SLC22A23A1A5C7 686 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 A8MUA0 341 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 TO15178 435 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 GFRA3O60609 400 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 TSPAN2O60636 221 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DDAH2O95865 285 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 IGHMP01871 453 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 CD74P04233 296 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 SPARCP09486 303 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ZNF735P0CB33 412 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 CAPZA1P52907 286 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 CLDN6P56747 220 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 BTN1A1Q13410 526 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 C1orf100Q5SVJ3 147 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
UBA3-202ENST00000361055 MARCH3Q86UD3 253 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ZNF546Q86UE3 836 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 OR1S1Q8NH92 325 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ST8SIA4Q92187 359 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 SLC25A36Q96CQ1 311 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ABHD6Q9BV23 337 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DNTTIP1Q9H147 329 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 SLC39A1Q9NY26 324 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 CYB5R1Q9UHQ9 305 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
UBA3-202ENST00000361055 NUP210LQ5VU65 1888 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 CCDC187A0A096LP49 1063 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 A8MVM7 634 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ISG15P05161 165 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 IL12BP29460 328 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 CRABP1P29762 137 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 OR1D4P47884 311 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 POLR2HP52434 150 aaKnown RBP11.09□□□□□ -0.63
UBA3-202ENST00000361055 ADAM8P78325 824 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 EIF2B1Q14232 305 aaKnown RBP11.09□□□□□ -0.63
UBA3-202ENST00000361055 LY6G6FQ5SQ64 297 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 LPCAT3Q6P1A2 487 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 DMRTA2Q96SC8 542 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 KCNK15Q9H427 330 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 C12orf4Q9NQ89 552 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 PRELID1Q9Y255 219 aa11.09□□□□□ -0.63
UBA3-202ENST00000361055 MRPS18BQ9Y676 258 aaKnown RBP11.09□□□□□ -0.63
UBA3-202ENST00000361055 ZNF292O60281 2723 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 WDFY3Q8IZQ1 3526 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 TMED7-TICAM2A0A0A6YYA0 188 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 TRAV14DV4A0A0A6YYC5 116 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 A0A1B0GTI1 187 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 TMEM200CA6NKL6 621 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 POM121CA8CG34 1229 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 PLPP3O14495 311 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 TSPAN4O14817 238 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 SRSF10O75494 262 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms