RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 OR10AD1Q8NGE0 317 aa11.52□□□□□ -0.57
VPS29-201ENST00000360579 FAM110DQ8TAY7 271 aaPredicted RBP11.52□□□□□ -0.57
VPS29-201ENST00000360579 TAMM41Q96BW9 452 aa11.52□□□□□ -0.57
VPS29-201ENST00000360579 RASD2Q96D21 266 aa11.52□□□□□ -0.57
VPS29-201ENST00000360579 ZNF582Q96NG8 517 aaPredicted RBP11.52□□□□□ -0.57
VPS29-201ENST00000360579 ACOXLQ9NUZ1 547 aa11.52□□□□□ -0.57
VPS29-201ENST00000360579 NKIRAS1Q9NYS0 192 aa11.52□□□□□ -0.57
VPS29-201ENST00000360579 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
VPS29-201ENST00000360579 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 TOX4O94842 621 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 CFHR2P36980 270 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 AGKQ53H12 422 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 RUSC1-AS1Q66K80 236 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 C1orf94Q6P1W5 598 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 FBXW12Q6X9E4 464 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 GDPGP1Q6ZNW5 385 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 DHDDSQ86SQ9 333 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 OR5AS1Q8N127 324 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 CLDN22Q8N7P3 220 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 LRTOMTQ8WZ04 291 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 ERGIC1Q969X5 290 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 CCDC28BQ9BUN5 200 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 CDADC1Q9BWV3 514 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 RIMS3Q9UJD0 308 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 BAG5Q9UL15 447 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 SH3GLB1Q9Y371 365 aa11.51□□□□□ -0.57
VPS29-201ENST00000360579 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 ERFP50548 548 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 MTPNP58546 118 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 CTXN1P60606 82 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 AQP6Q13520 282 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 KCNJ8Q15842 424 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 ANKDD1AQ495B1 522 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 LDLRAD3Q86YD5 345 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 ZSCAN4Q8NAM6 433 aaPredicted RBP11.5□□□□□ -0.57
VPS29-201ENST00000360579 DPAGT1Q9H3H5 408 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 RABEP2Q9H5N1 569 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 KAT8Q9H7Z6 458 aaKnown RBP11.5□□□□□ -0.57
VPS29-201ENST00000360579 EMC7Q9NPA0 242 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 ATPIF1Q9UII2 106 aa11.5□□□□□ -0.57
VPS29-201ENST00000360579 C22orf46C9J442 243 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 PIN1P1O15428 100 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 AHCYL1O43865 530 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 SFTPBP07988 381 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 CSF1P09603 554 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 MMP9P14780 707 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 PSMB10P40306 273 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 GATA4P43694 442 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 IER3P46695 156 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 PIN1Q13526 163 aaPredicted RBP11.49□□□□□ -0.57
VPS29-201ENST00000360579 METTL11BQ5VVY1 283 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 OR2T2Q6IF00 324 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 CCDC80Q76M96 950 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 DPP10Q8N608 796 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 CELF2-AS1Q8N7Q2 184 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 PNLDC1Q8NA58 520 aaKnown RBP11.49□□□□□ -0.57
VPS29-201ENST00000360579 OR11L1Q8NGX0 322 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 Q8TCH9 128 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 LRRC8CQ8TDW0 803 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 APOBEC3DQ96AK3 386 aaPredicted RBP11.49□□□□□ -0.57
VPS29-201ENST00000360579 BPIFA2Q96DR5 249 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 C7orf26Q96N11 449 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 WDFY2Q96P53 400 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 TECTBQ96PL2 329 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 TBX15Q96SF7 602 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 CGREF1Q99674 301 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 C16orf95Q9H693 158 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 TMEM100Q9NV29 134 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 ERVK-18Q9QC07 812 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 NDUFAF1Q9Y375 327 aa11.49□□□□□ -0.57
VPS29-201ENST00000360579 IGHV1-69DA0A0B4J2H0 117 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 IQCF6A8MYZ5 107 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 F5H5P2 479 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 ANGPT2O15123 496 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 MLNRO43193 412 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 IGHV1-69P01742 117 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 SCG5P05408 212 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 IFNA8P32881 189 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 IDH3AP50213 366 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 SELPLGQ14242 412 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 VMACQ2NL98 169 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 BEAN1Q3B7T3 259 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 FAM201AQ5SY85 155 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 SCCPDHQ8NBX0 429 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 OR1F12Q8NHA8 337 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 PTTG3PQ9NZH4 202 aa11.48□□□□□ -0.57
VPS29-201ENST00000360579 IGHV3-64DA0A0J9YX35 117 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 A0A1B0GWJ7 208 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 H0YL77 283 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 FBP2O00757 339 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 XKRYO14609 159 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 PIP5K1CO60331 668 aa11.47□□□□□ -0.57
VPS29-201ENST00000360579 IFNA14P01570 189 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms