RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 MYRFQ9Y2G1 1151 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 LRRC42Q9Y546 428 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 TACC2O95359 2948 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 HECTD1Q9ULT8 2610 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 LOC100509620A0A075B734 347 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 IGHV2OR16-5A0A0B4J2B6 119 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 DPRXA6NFQ7 191 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 DEFB108AA8MXU0 73 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 J3QRE1 110 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 PSMD9O00233 223 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 CD3EP07766 207 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 CCDC159P0C7I6 412 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 PIPP12273 146 aaPredicted RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 COL8A1P27658 744 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 HSD11B1P28845 292 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 GRB2P62993 217 aaKnown RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 LRRN1Q6UXK5 716 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 STX19Q8N4C7 294 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 MROQ9BYG7 248 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 FGF20Q9NP95 211 aaPredicted RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 TPRKBQ9Y3C4 175 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 A6NNC1 897 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 PTGES3LE9PB15 166 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 F5H5K5 113 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 SIAH2O43255 324 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 DBHP09172 617 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 MYL12AP19105 171 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 DCKP27707 260 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 OPRL1P41146 370 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 SPOCK1Q08629 439 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 ST3GAL4Q11206 333 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 RBM48Q5RL73 367 aaKnown RBP13.21□□□□□ -0.3
TPM1-206ENST00000358278 ADAM5Q6NVV9 412 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 SLC22A25Q6T423 547 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 RHOUQ7L0Q8 258 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 SSX6Q7RTT6 188 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 SNX33Q8WV41 574 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 MRPL48Q96GC5 212 aaKnown RBP13.21□□□□□ -0.3
TPM1-206ENST00000358278 TMEM80Q96HE8 168 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 RADILQ96JH8 1075 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 POM121L2Q96KW2 1035 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 INPP5EQ9NRR6 644 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 LRP12Q9Y561 859 aa13.21□□□□□ -0.3
TPM1-206ENST00000358278 ATP6V1G2-DDX39BF2Z307 99 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 ABHD16AO95870 558 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 IGHA1P01876 353 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 CALCRP30988 508 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 SLC6A9P48067 706 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 ZNF85Q03923 595 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 EGR3Q06889 387 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 DAZAP2Q15038 168 aaPredicted RBP13.2□□□□□ -0.3
TPM1-206ENST00000358278 LHFPL3Q86UP9 236 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 ZNF679Q8IYX0 411 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 PAQR4Q8N4S7 273 aaPredicted RBP13.2□□□□□ -0.3
TPM1-206ENST00000358278 OR8B4Q96RC9 309 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
TPM1-206ENST00000358278 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
TPM1-206ENST00000358278 LRCH1Q9Y2L9 728 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 GRIP1Q9Y3R0 1128 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 RNF115Q9Y4L5 304 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 BAHCC1Q9P281 2608 aa13.2□□□□□ -0.3
TPM1-206ENST00000358278 PRR32B1ATL7 298 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 M0R135 149 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 KRT8P05787 483 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ZNF35P13682 527 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 CRHBPP24387 322 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 EEF1B2P24534 225 aaKnown RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 PRKXP51817 358 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 RIDAP52758 137 aaKnown RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 TPTEP56180 551 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ACTA2P62736 377 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ACTG2P63267 376 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ROM1Q03395 351 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 AKAP6Q13023 2319 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 DEGS2Q6QHC5 323 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ARL9Q6T311 187 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 FAM220AQ7Z4H9 259 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ZNF283Q8N7M2 679 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 MYDGFQ969H8 173 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ZNF799Q96GE5 643 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ALG8Q9BVK2 526 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 OR51B6Q9H340 312 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 ERVK13-1Q9NX77 482 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 SLCO1C1Q9NYB5 712 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 EIF3KQ9UBQ5 218 aaKnown RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 MAGEB4O15481 346 aaPredicted RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 ZNF254O75437 659 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 GOSR1O95249 250 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 CX3CR1P49238 355 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 SLC35A2P78381 396 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 GALEQ14376 348 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 PLEKHG7Q6ZR37 379 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 YIPF7Q8N8F6 280 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms