RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 UBA52P62987 128 aaKnown RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 C17orf67Q0P5P2 114 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 TMEM116Q8NCL8 245 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 NIPSNAP3BQ9BS92 247 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 TMEM218A2RU14 115 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ZNF724A8MTY0 619 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 TRIM77I1YAP6 450 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 CCSO14618 274 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 OR4A8P0C604 315 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 FABP4P15090 132 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 C1orf220Q5T0J3 134 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 GAREM2Q75VX8 874 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ASB17Q8WXJ9 295 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 TTC9Q92623 222 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 PACRGQ96M98 296 aaPredicted RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 A0A0B4J293 547 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 POU3F3P20264 500 aaPredicted RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 LGALS7P47929 136 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 WDR5P61964 334 aaKnown RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 SH3BP2P78314 561 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ALKBH1Q13686 389 aaKnown RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 RGNQ15493 299 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 XKR7Q5GH72 579 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 OR4C5Q8NGB2 326 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 NEIL2Q969S2 332 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 SPACA9Q96E40 222 aaPredicted RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 ANKRD60Q9BZ19 345 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 IL17BQ9UHF5 180 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ID4P47928 161 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 RAB1AP62820 205 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 SEMA3BQ13214 749 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 CD200R1Q8TD46 325 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ELP4Q96EB1 424 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 SLC22A12Q96S37 553 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 NEURL2Q9BR09 285 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 AK3Q9UIJ7 227 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 OSGIN1Q9UJX0 560 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 COL2A1P02458 1487 aaPredicted RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 OR4C46A6NHA9 309 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 SYNGR2O43760 224 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 CTSAP10619 480 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 HTR2CP28335 458 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 BSGP35613 385 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 LSM11P83369 360 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD3-202ENST00000358181 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 GLIPR1L1Q6UWM5 242 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 LYPD4Q6UWN0 246 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 C17orf99Q6UX52 265 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 C14orf79Q96F83 325 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 DMRTA2Q96SC8 542 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 OR51J1Q9H342 316 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 RHOFQ9HBH0 211 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 MMP17Q9ULZ9 603 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 TRGV10A0A0A0MS01 117 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 A0A1B0GTQ1 180 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ATP6V1G2-DDX39BF2Z307 99 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 M0R3E3 92 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 G6PCP35575 357 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 HTRA4P83105 476 aaPredicted RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 BTN1A1Q13410 526 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 ECSCRQ19T08 205 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 FAM78AQ5JUQ0 283 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 MEPCEQ7L2J0 689 aaKnown RBP8.93□□□□□ -0.98
CHD3-202ENST00000358181 LMO3Q8TAP4 145 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 SARAFQ96BY9 339 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 RASL11BQ9BPW5 248 aa8.93□□□□□ -0.98
CHD3-202ENST00000358181 A0A087WV62 115 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 TEX50A0A1B0GTY4 177 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 FZD6O60353 706 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 RECKO95980 971 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 CDK5R2Q13319 367 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 EIF4HQ15056 248 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 CCBE1Q6UXH8 406 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 ERGIC1Q969X5 290 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 FGF21Q9NSA1 209 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 RCE1Q9Y256 329 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 STYXL1Q9Y6J8 313 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 CSO75390 466 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 ZNF205O95201 554 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 TACR1P25103 407 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 ZNF420Q8TAQ5 688 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 PLA2G12AQ9BZM1 189 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 CHST8Q9H2A9 424 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 TMEM82A0PJX8 343 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 HMGN2P05204 90 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 SPINK2P20155 84 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 ZNF93P35789 620 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 RPL30P62888 115 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 KLRB1Q12918 225 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 RPE65Q16518 533 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 CORO6Q6QEF8 472 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 ABI3BPQ7Z7G0 1075 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 SLC7A13Q8TCU3 470 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 C1orf74Q96LT6 269 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 BCL7BQ9BQE9 202 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 MYO18AQ92614 2054 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 SMLR1H3BR10 107 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 ELK1P19419 428 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms