RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 IL20RAQ9UHF4 553 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 SAMD4AQ9UPU9 718 aaKnown RBP9□□□□□ -0.97
CAPN3-204ENST00000356316 AUP1Q9Y679 476 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 UNC119BA6NIH7 251 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 LRRC30A6NM36 301 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 RENP00797 406 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 IGHV2-70P01814 119 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 ZFP36P26651 326 aaKnown RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 MDH1P40925 334 aaKnown RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 MDH2P40926 338 aaKnown RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SLC6A9P48067 706 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SRP9P49458 86 aaKnown RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 COMPP49747 757 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 PSME3P61289 254 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 ESCO2Q56NI9 601 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SPRNQ5BIV9 151 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SMARCD3Q6STE5 483 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 OR5AS1Q8N127 324 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 MUC20Q8N307 709 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 OR52J3Q8NH60 311 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 ITLN1Q8WWA0 313 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SLC7A6Q92536 515 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 ERMAPQ96PL5 475 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 HCAR1Q9BXC0 346 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 PLA2G12AQ9BZM1 189 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 POFUT1Q9H488 388 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SRA1Q9HD15 236 aaKnown RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 PTTG3PQ9NZH4 202 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 VSX1Q9NZR4 365 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-204ENST00000356316 NDUFAF4Q9P032 175 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 OR5V1Q9UGF6 321 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 OPN4Q9UHM6 478 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 NUP50Q9UKX7 468 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 SIGLEC7Q9Y286 467 aa8.99□□□□□ -0.97
CAPN3-204ENST00000356316 TENM1Q9UKZ4 2725 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 RER1O15258 196 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 IRF2P14316 349 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 SELEP16581 610 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 ZNF26P17031 533 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 CPT2P23786 658 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 NOS3P29474 1203 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 IFNGR2P38484 337 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 CDKN2AP42771 156 aaKnown RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 OMPP47874 163 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 ZNF154Q13106 437 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 HLXQ14774 488 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 KCNMB1Q16558 191 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 SLC36A3Q495N2 470 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 CCDC92Q53HC0 331 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 OTPQ5XKR4 325 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 C8orf82Q6P1X6 216 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 Q6ZR03 302 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 JAZF1Q86VZ6 243 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 OR8G5Q8NG78 346 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 OR2AJ1Q8NGZ0 328 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 SGMS2Q8NHU3 365 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 MCUR1Q96AQ8 359 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 PLEKHA8Q96JA3 519 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 GPX7Q96SL4 187 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 HDHD2Q9H0R4 259 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 GCM1Q9NP62 436 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 MED4Q9NPJ6 270 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 MMP26Q9NRE1 261 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 DCAF13Q9NV06 445 aaKnown RBP8.98□□□□□ -0.97
CAPN3-204ENST00000356316 TMEM100Q9NV29 134 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
CAPN3-204ENST00000356316 TRAPPC2LH3BP13 241 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 TMEM178BH3BS89 294 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 IMPA2O14732 288 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 GADD45GO95257 159 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 PPP1R3DO95685 299 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 HLA-DQA2P01906 255 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 DBHP09172 617 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 SLC6A6P31641 620 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 GNB2P62879 340 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 FOXL1Q12952 345 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 ECH1Q13011 328 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 MALLQ13021 153 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 ZMYND11Q15326 602 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 RFX4Q33E94 735 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 OR2T2Q6IF00 324 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 LEG1Q6P5S2 330 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 BTNL3Q6UXE8 466 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 FBXW12Q6X9E4 464 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 C1orf87Q8N0U7 546 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 PYURFQ96I23 114 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 PITX2Q99697 317 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 COQ7Q99807 217 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 ELAC2Q9BQ52 826 aaKnown RBP8.97□□□□□ -0.97
CAPN3-204ENST00000356316 IFT27Q9BW83 186 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 MS4A7Q9GZW8 240 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-204ENST00000356316 NSRP1Q9H0G5 558 aaKnown RBP8.97□□□□□ -0.97
CAPN3-204ENST00000356316 DCAF16Q9NXF7 216 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 MIOXQ9UGB7 285 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 TMCC3Q9ULS5 477 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 B9D1Q9UPM9 204 aa8.97□□□□□ -0.97
CAPN3-204ENST00000356316 LRCH1Q9Y2L9 728 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms