RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ABRACLQ9P1F3 81 aa8.46□□□□□ -1.05
SMG6-202ENST00000354901 LOC390937A0A1W2PQ73 354 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 TVP23AA6NH52 213 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 RNASEK-C17orf49H0YIS7 233 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 TGFBR3LH3BV60 316 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 ZNF432O94892 652 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 HLA-AP01891 365 aaKnown RBP8.46□□□□□ -1.06
SMG6-202ENST00000354901 F13BP05160 661 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 ACKR3P25106 362 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 CTHP32929 405 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 GLP1RP43220 463 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 HTR5AP47898 357 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 ZNF84P51523 738 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 DLX2Q07687 328 aaPredicted RBP8.46□□□□□ -1.06
SMG6-202ENST00000354901 CDK5R1Q15078 307 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 FAM189A2Q15884 450 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 ZNF529Q6P280 563 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 BAIAP2L2Q6UXY1 529 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
SMG6-202ENST00000354901 GPR61Q9BZJ8 451 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 TRIM2Q9C040 744 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 LYRM4Q9HD34 91 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 UNC13CQ8NB66 2214 aa8.46□□□□□ -1.06
SMG6-202ENST00000354901 A0A0J9YY10 115 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 TCRBV21S2A2A0A5A6 115 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 A6NCN8 305 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 TMEM235A6NFC5 223 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ACOT7O00154 380 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 MT-ND4LP03901 98 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 OR8G3PP0DMU2 310 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 CTSEP14091 401 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 EIF2B1Q14232 305 aaKnown RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 MEF2DQ14814 521 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ZNF385CQ66K41 422 aaPredicted RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 LEG1Q6P5S2 330 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 DEFB119Q8N690 84 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 OR14K1Q8NGZ2 314 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 SMIM19Q96E16 107 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 SEC11CQ9BY50 192 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 OPN3Q9H1Y3 402 aaPredicted RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 NCDNQ9UBB6 729 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 GTF2A1LQ9UNN4 478 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ANKRD20A5PA0PJZ0 165 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 C9JQL5 133 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 TNFSF14O43557 240 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 EIF4E2O60573 245 aaKnown RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 ARL6IP5O75915 188 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 NKX2-2O95096 273 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 AMY2AP04746 511 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ACTC1P68032 377 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ACTA1P68133 377 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 CDNFQ49AH0 187 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 C11orf87Q6NUJ2 197 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 NPSR1Q6W5P4 371 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 PXKQ7Z7A4 578 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 KCNRGQ8N5I3 272 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 C15orf54Q8N8G6 183 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 NKD1Q969G9 470 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 S1PR5Q9H228 398 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 SPACA1Q9HBV2 294 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 APMAPQ9HDC9 416 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 INPP5EQ9NRR6 644 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 RCC2Q9P258 522 aaKnown RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 SLCO1B1Q9Y6L6 691 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 C17orf51A8MQB3 221 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ZNF208O43345 1280 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 GPANK1O95872 356 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 IL5P05113 134 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 HCKP08631 526 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 DCDP81605 110 aaKnown RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 HHEXQ03014 270 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 PJVKQ0ZLH3 352 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 FHL1Q13642 323 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 CSRP2Q16527 193 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 ULK3Q6PHR2 472 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 CD163Q86VB7 1156 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 PRR22Q8IZ63 422 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 RNF141Q8WVD5 230 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 CPNE4Q96A23 557 aaPredicted RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 SMIM3Q9BZL3 60 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 EIF5A2Q9GZV4 153 aaKnown RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 CHRNA9Q9UGM1 479 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 IKZF2Q9UKS7 526 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 CARHSP1Q9Y2V2 147 aaKnown RBP8.45□□□□□ -1.06
SMG6-202ENST00000354901 AMDHD2Q9Y303 409 aa8.45□□□□□ -1.06
SMG6-202ENST00000354901 PUS1Q9Y606 427 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMG6-202ENST00000354901 PRR32B1ATL7 298 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 IFNA17P01571 189 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 OR4E1P0C645 316 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 SLC35E2P0CK97 266 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 TPT1P13693 172 aaKnown RBP8.44□□□□□ -1.06
SMG6-202ENST00000354901 GALP22466 123 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 NANOS3P60323 173 aaKnown RBP8.44□□□□□ -1.06
SMG6-202ENST00000354901 ZNF616Q08AN1 781 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 BATFQ16520 125 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 DHRS11Q6UWP2 260 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 GLB1L2Q8IW92 636 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 SLC22A18ASQ8N1D0 253 aa8.44□□□□□ -1.06
SMG6-202ENST00000354901 ACBD4Q8NC06 268 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms