RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 METRNLQ641Q3 311 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 USP53Q70EK8 1073 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 TP53I13Q8NBR0 393 aaPredicted RBP16.46■□□□□ 0.22
SMC4-201ENST00000344722 WWTR1Q9GZV5 400 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 MGST1P10620 155 aaKnown RBP16.45■□□□□ 0.22
SMC4-201ENST00000344722 IRS1P35568 1242 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 IL10RAQ13651 578 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 IQCJQ1A5X6 159 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 KIAA0895LQ68EN5 471 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 MRM1Q6IN84 353 aaKnown RBP16.45■□□□□ 0.22
SMC4-201ENST00000344722 SLC38A9Q8NBW4 561 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 NECAP1Q8NC96 275 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 HTR5AP47898 357 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 ELLP55199 621 aaPredicted RBP16.45■□□□□ 0.22
SMC4-201ENST00000344722 MIDNQ504T8 468 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 AGBL4Q5VU57 503 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 BTNL8Q6UX41 500 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 PIGTQ969N2 578 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 WSB2Q9NYS7 404 aaPredicted RBP16.45■□□□□ 0.22
SMC4-201ENST00000344722 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 MBTPS2O43462 519 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 PGFP49763 221 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 AGERQ15109 404 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 ZNF787Q6DD87 383 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 GPX8Q8TED1 209 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 BCO1Q9HAY6 547 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 KCNG2Q9UJ96 466 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 POM121BA6NF01 834 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 GPR31O00270 319 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 CD79AP11912 226 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 SLC35A1P78382 337 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 GCNT2Q8N0V5 402 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 TINAGL1Q9GZM7 467 aaPredicted RBP16.45■□□□□ 0.22
SMC4-201ENST00000344722 ZNF346Q9UL40 294 aaKnown RBP16.45■□□□□ 0.22
SMC4-201ENST00000344722 DAPP1Q9UN19 280 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 R4GMQ9 66 aa16.45■□□□□ 0.22
SMC4-201ENST00000344722 PHLPP1O60346 1717 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 FZD6O60353 706 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 CST5P28325 142 aaPredicted RBP16.44■□□□□ 0.22
SMC4-201ENST00000344722 ZNF429Q86V71 674 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 OR51A2Q8NGJ7 313 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 UQCC1Q9NVA1 299 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 SLC5A6Q9Y289 635 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 DOCK2Q92608 1830 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 PRAMEF26H0Y7S4 382 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 EIF4E2O60573 245 aaKnown RBP16.44■□□□□ 0.22
SMC4-201ENST00000344722 NXPH3O95157 252 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 CLDN17P56750 224 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 MAT1AQ00266 395 aaKnown RBP16.44■□□□□ 0.22
SMC4-201ENST00000344722 NCR3LG1Q68D85 454 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 ARRDC1Q8N5I2 433 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 SEC11CQ9BY50 192 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 PIGLQ9Y2B2 252 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 DHRS2Q13268 280 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 TMEM65Q6PI78 240 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 ARIH2OSQ8N7S6 290 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 SIGLECL1Q8N7X8 197 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 ZNF426Q9BUY5 554 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 MRPL22Q9NWU5 206 aaKnown RBP16.44■□□□□ 0.22
SMC4-201ENST00000344722 KCNE1BA0A087WTH5 132 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 ERVH48-1M5A8F1 160 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 ACTL6BO94805 426 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 OPN1LWP04000 364 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 PI3P19957 117 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 SUMO1P63165 101 aaKnown RBP16.44■□□□□ 0.22
SMC4-201ENST00000344722 RAE1P78406 368 aaKnown RBP16.44■□□□□ 0.22
SMC4-201ENST00000344722 LCN15Q6UWW0 184 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 SMIM7Q9BQ49 75 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 HDAC8Q9BY41 377 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 TRAPPC2LQ9UL33 140 aa16.44■□□□□ 0.22
SMC4-201ENST00000344722 SDCBPO00560 298 aaPredicted RBP16.43■□□□□ 0.22
SMC4-201ENST00000344722 CFIP05156 583 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 EEF1A1P68104 462 aaKnown RBP16.43■□□□□ 0.22
SMC4-201ENST00000344722 TLE1Q04724 770 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 AARDQ4LEZ3 155 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 RTL10Q7L3V2 364 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 FAM24BQ8N5W8 94 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 C19orf47Q8N9M1 422 aaKnown RBP16.43■□□□□ 0.22
SMC4-201ENST00000344722 GPR119Q8TDV5 335 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 KIR3DX1Q9H7L2 352 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 RAB18Q9NP72 206 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 SEC14L6B5MCN3 397 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 HSD17B6O14756 317 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 PNLIPRP3Q17RR3 467 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 OVCH2Q7RTZ1 564 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 PLEKHF2Q9H8W4 249 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 V9GYS6 101 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 SRPK3Q9UPE1 567 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 GATCO43716 136 aaKnown RBP16.43■□□□□ 0.22
SMC4-201ENST00000344722 CEBPBP17676 345 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 H1FNTQ75WM6 255 aaPredicted RBP16.43■□□□□ 0.22
SMC4-201ENST00000344722 OR5M9Q8NGP3 310 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 SAT2Q96F10 170 aaPredicted RBP16.43■□□□□ 0.22
SMC4-201ENST00000344722 FKRPQ9H9S5 495 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 TUBGCP6Q96RT7 1819 aa16.43■□□□□ 0.22
SMC4-201ENST00000344722 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 TUSC2O75896 110 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 C17orf67Q0P5P2 114 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 SLC35B3Q9H1N7 401 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms