RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 EMG1Q92979 244 aaKnown RBP12.49□□□□□ -0.41
TRIO-202ENST00000344204 OPN3Q9H1Y3 402 aaPredicted RBP12.49□□□□□ -0.41
TRIO-202ENST00000344204 WSB1Q9Y6I7 421 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 GLSO94925 669 aaPredicted RBP12.49□□□□□ -0.41
TRIO-202ENST00000344204 PLAC9Q5JTB6 97 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 NKX3-1Q99801 234 aaPredicted RBP12.49□□□□□ -0.41
TRIO-202ENST00000344204 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 SELENOFO60613 162 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 PRF1P14222 555 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 PLCXD2Q0VAA5 305 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 MRPS24Q96EL2 167 aaKnown RBP12.49□□□□□ -0.41
TRIO-202ENST00000344204 MOGAT1Q96PD6 335 aa12.49□□□□□ -0.41
TRIO-202ENST00000344204 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 MPC2O95563 127 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 APODP05090 189 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 ZNF93P35789 620 aaPredicted RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 DDIT4LQ96D03 193 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 TANC2Q9HCD6 1990 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 B4DEV8 164 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 ZDHHC22Q8N966 263 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 ISG20L2Q9H9L3 353 aaKnown RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 A0A1B0GV72 72 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 CD99P14209 185 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 SKP2Q13309 424 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 ABI3BPQ7Z7G0 1075 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 TCRBV5S1A1TA0A578 114 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 C7orf77A4D0Y5 90 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 CALHM3Q86XJ0 350 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 TMEM229BQ8NBD8 167 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 TMEM255BQ8WV15 326 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 IL22RA2Q969J5 263 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 HINT3Q9NQE9 182 aaKnown RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 FLVCR1Q9Y5Y0 555 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 DERL3Q96Q80 235 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 CLDN34H7C241 214 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 GSTZ1O43708 216 aaPredicted RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 NMBP08949 121 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 USP53Q70EK8 1073 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 NUDT8Q8WV74 236 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 ZNF888P0CJ79 500 aaPredicted RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 CRMP1Q14194 572 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
TRIO-202ENST00000344204 CXorf36Q9H7Y0 433 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 SLC23A2Q9UGH3 650 aa12.48□□□□□ -0.41
TRIO-202ENST00000344204 M0R1X1 148 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 SLC6A8P48029 635 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 CTBSQ01459 385 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 ZNF345Q14585 488 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 PRICKLE2Q7Z3G6 844 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 AIFM1O95831 613 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 PMCHP20382 165 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 OR5L2Q8NGL0 311 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 KLK6Q92876 244 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
TRIO-202ENST00000344204 A6NDN8 102 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 CCL16O15467 120 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 DAOP14920 347 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 TBXA2RP21731 343 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 ABCA3Q99758 1704 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 PLA2G10O15496 165 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 IHHQ14623 411 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 LCN15Q6UWW0 184 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 OR2D3Q8NGH3 330 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 PRTFDC1Q9NRG1 225 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 PAM16Q9Y3D7 125 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 LEFTY1O75610 366 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 CD200P41217 278 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 PLA1AQ53H76 456 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 TMEM268Q5VZI3 342 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 OR4N5Q8IXE1 308 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 MAN2B1O00754 1011 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
TRIO-202ENST00000344204 LTB4RQ15722 352 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 STUMQ69YW2 141 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 OR4A47Q6IF82 309 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 MDGA1Q8NFP4 955 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 CDK5R1Q15078 307 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 EXD3Q8N9H8 876 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
TRIO-202ENST00000344204 SLC31A1O15431 190 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 ZP2Q05996 745 aa12.47□□□□□ -0.41
TRIO-202ENST00000344204 DND1Q8IYX4 353 aaKnown RBP12.47□□□□□ -0.41
TRIO-202ENST00000344204 A8MVM7 634 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 TAPBPO15533 448 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 OR10J1P30954 320 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
TRIO-202ENST00000344204 WDR5BQ86VZ2 330 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 MSI2Q96DH6 328 aaKnown RBP12.46□□□□□ -0.41
TRIO-202ENST00000344204 CIB3Q96Q77 187 aaPredicted RBP12.46□□□□□ -0.41
TRIO-202ENST00000344204 P2RY12Q9H244 342 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 NKX2-4Q9H2Z4 354 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms