RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TAS2R4Q9NYW5 299 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 FOXJ3Q9UPW0 622 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 LMX1BO60663 402 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 ITGB2P05107 769 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 IGFBP3P17936 291 aaPredicted RBP17.64■□□□□ 0.41
RTN1-202ENST00000342503 PRKXP51817 358 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 PPIAP62937 165 aaKnown RBP17.64■□□□□ 0.41
RTN1-202ENST00000342503 ZNF766Q5HY98 468 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 PPP1R14BQ96C90 147 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 SLC25A38Q96DW6 304 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 SCMH1Q96GD3 660 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 SLC22A4Q9H015 551 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 DDX28Q9NUL7 540 aaKnown RBP17.64■□□□□ 0.41
RTN1-202ENST00000342503 ZNF708P17019 499 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 CCL11P51671 97 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 LRRC18Q8N456 261 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 CELF2-AS1Q8N7Q2 184 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 ABHD3Q8WU67 409 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 CAMK2AQ9UQM7 478 aa17.64■□□□□ 0.41
RTN1-202ENST00000342503 NCOA6Q14686 2063 aaPredicted RBP17.63■□□□□ 0.41
RTN1-202ENST00000342503 UBL3O95164 117 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 ADRB1P08588 477 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 FSTP19883 344 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 NR4A2P43354 598 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 BAIAP2L2Q6UXY1 529 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 MEIOBQ8N635 442 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 ZFP62Q8NB50 900 aaPredicted RBP17.63■□□□□ 0.41
RTN1-202ENST00000342503 THAP7Q9BT49 309 aaPredicted RBP17.63■□□□□ 0.41
RTN1-202ENST00000342503 HDHD2Q9H0R4 259 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 MOB1AQ9H8S9 216 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 CKLFQ9UBR5 152 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 STEAP1Q9UHE8 339 aa17.63■□□□□ 0.41
RTN1-202ENST00000342503 NUFIP1Q9UHK0 495 aaKnown RBP17.63■□□□□ 0.41
RTN1-202ENST00000342503 TTLL8A6PVC2 850 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 LANCL1O43813 399 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 CX3CR1P49238 355 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 INPP1P49441 399 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 ZNF121P58317 390 aaPredicted RBP17.62■□□□□ 0.41
RTN1-202ENST00000342503 GRB2P62993 217 aaKnown RBP17.62■□□□□ 0.41
RTN1-202ENST00000342503 MRPS34P82930 218 aaKnown RBP17.62■□□□□ 0.41
RTN1-202ENST00000342503 IZUMO1Q8IYV9 350 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 UBE2J2Q8N2K1 259 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 GJC3Q8NFK1 279 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 RFT1Q96AA3 541 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 MRPS7Q9Y2R9 242 aaKnown RBP17.62■□□□□ 0.41
RTN1-202ENST00000342503 N6AMT1Q9Y5N5 214 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 ETV7Q9Y603 341 aa17.62■□□□□ 0.41
RTN1-202ENST00000342503 EEF1E1O43324 174 aaKnown RBP17.61■□□□□ 0.41
RTN1-202ENST00000342503 SLC2A1P11166 492 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 HIST1H3AP68431 136 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 PITPNAQ00169 270 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 CCDC92Q53HC0 331 aaPredicted RBP17.61■□□□□ 0.41
RTN1-202ENST00000342503 HIST2H3PS2Q5TEC6 136 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ZNF57Q68EA5 555 aaPredicted RBP17.61■□□□□ 0.41
RTN1-202ENST00000342503 HIST2H3AQ71DI3 136 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 LINGO2Q7L985 606 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 LUZP2Q86TE4 346 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 GPR137CQ8N3F9 429 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ZNF283Q8N7M2 679 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 SYNPRQ8TBG9 265 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 TRIM63Q969Q1 353 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 NEURL2Q9BR09 285 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 CRLF2Q9HC73 371 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ETAA1Q9NY74 926 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 LIPGQ9Y5X9 500 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 SYT7O43581 403 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 CFPP27918 469 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 CLN3Q13286 438 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 CAMK2BQ13554 666 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 SLC10A1Q14973 349 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 PLXDC2Q6UX71 529 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.61■□□□□ 0.41
RTN1-202ENST00000342503 SERPINA12Q8IW75 414 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 FAM109AQ8N4B1 249 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 TMEM178AQ8NBL3 297 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 PLPP7Q8NBV4 271 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 FDCSPQ8NFU4 85 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 OR8B12Q8NGG6 310 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 CPT1CQ8TCG5 803 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 TMEM45BQ96B21 275 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 FGGYQ96C11 551 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ZFP3Q96NJ6 502 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ABCG5Q9H222 651 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ACKR4Q9NPB9 350 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ZNF275Q9NSD4 429 aaPredicted RBP17.61■□□□□ 0.41
RTN1-202ENST00000342503 CSAG2Q9Y5P2 127 aa17.61■□□□□ 0.41
RTN1-202ENST00000342503 ZNF292O60281 2723 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 A0A1B0GTI1 187 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 SYNGR4O95473 234 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 HNRNPCP07910 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
RTN1-202ENST00000342503 MAP2K3P46734 347 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 TNFSF10P50591 281 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 GALK2Q01415 458 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 BCL2A1Q16548 175 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 FAM27BQ5VT28 67 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 ASCL5Q7RTU5 278 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 OR51E1Q8TCB6 317 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 FBXO17Q96EF6 278 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 ALKBH3Q96Q83 286 aaPredicted RBP17.6■□□□□ 0.41
RTN1-202ENST00000342503 DEFB127Q9H1M4 99 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms