RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DBHP09172 617 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 ACSM4P0C7M7 580 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 FAM157BP0CG42 384 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 CSRP1P21291 193 aaKnown RBP6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 TALDO1P37837 337 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 CCR9P51686 369 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 GFRA1P56159 465 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 GFOD2Q3B7J2 385 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 TMEM123Q8N131 208 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF454Q8N9F8 522 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 ADPRHL1Q8NDY3 354 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 SYNPRQ8TBG9 265 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 HAVCR2Q8TDQ0 301 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 ADGRG7Q96K78 797 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 ALKBH3Q96Q83 286 aaPredicted RBP6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 SPACA5Q96QH8 159 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC6A15Q9H2J7 730 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 C1orf198Q9H425 327 aa6.54□□□□□ -1.36
SRFBP1-201ENST00000339397 PRR14LQ5THK1 2151 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 LOC102725191A0A1B0GVB3 256 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 LYRM1O43325 122 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 KDM4BO94953 1096 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 HLA-DQB1P01920 261 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 CSNK1A1P48729 337 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 RAC3P60763 192 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 RIN1Q13671 783 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 GPR176Q14439 515 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF239Q16600 458 aaKnown RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 TMEM255AQ5JRV8 349 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 RNFT1Q5M7Z0 435 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 OR51E1Q8TCB6 317 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 YIPF5Q969M3 257 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 KIAA1143Q96AT1 154 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 UPRTQ96BW1 309 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FGGYQ96C11 551 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ADAT3Q96EY9 351 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 UTP23Q9BRU9 249 aaKnown RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 BEX2Q9BXY8 128 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ABRACLQ9P1F3 81 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 DHDHQ9UQ10 334 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 APC2O95996 2303 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF716A6NP11 495 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 EIF1BO60739 113 aaKnown RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ABOP16442 354 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 POU3F2P20265 443 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 CDK2P24941 298 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 RBMS1P29558 406 aaKnown RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF121P58317 390 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 CSNK2A1P68400 391 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FAM205BPQ63HN1 556 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FAAP20Q6NZ36 180 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 GLRX5Q86SX6 157 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 GALNT16Q8N428 558 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 CLEC1AQ8NC01 280 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 OR13C3Q8NGS6 347 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 PHYHIPQ92561 330 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 NABP1Q96AH0 204 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FBXO17Q96EF6 278 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 TTTY12Q9BZ98 90 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 PBOV1Q9GZY1 135 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF703Q9H7S9 590 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 CRLF2Q9HC73 371 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 TEKT2Q9UIF3 430 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FOXD3Q9UJU5 478 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ADAM30Q9UKF2 790 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 ELF5Q9UKW6 265 aaPredicted RBP6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 FLVCR1Q9Y5Y0 555 aa6.53□□□□□ -1.36
SRFBP1-201ENST00000339397 CDRT15L2A8MXV6 281 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 F5H5K5 113 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF17P17021 662 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 BTCP35070 178 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 MAP2K3P46734 347 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 FOXG1P55316 489 aaPredicted RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 PMP22Q01453 160 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 AIMP2Q13155 320 aaKnown RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ENDOGQ14249 297 aaKnown RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 C2orf76Q3KRA6 126 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 GLYATL3Q5SZD4 288 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 RAB43Q86YS6 212 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM251Q8N6I4 163 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 FGFBP3Q8TAT2 258 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 SETD6Q8TBK2 473 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 RFT1Q96AA3 541 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC22A4Q9H015 551 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ABCG5Q9H222 651 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ASCL3Q9NQ33 180 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 LIPGQ9Y5X9 500 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ACACAQ13085 2346 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 A0A1B0GTI1 187 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM240BA0A1B0GVZ2 78 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 TM4SF5O14894 197 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ORC5O43913 435 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 RAF1P04049 648 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 FKBP2P26885 142 aaKnown RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 MAPK3P27361 379 aaPredicted RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 PTH2RP49190 550 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 POU3F4P49335 361 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 MMP16P51512 607 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms