RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ANKDD1AQ495B1 522 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 PDLIM3Q53GG5 364 aaPredicted RBP13.11□□□□□ -0.31
LINC01116-202ENST00000339037 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 BTNL3Q6UXE8 466 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 C9orf139Q6ZV77 190 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 SSBP3Q9BWW4 388 aaPredicted RBP13.11□□□□□ -0.31
LINC01116-202ENST00000339037 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
LINC01116-202ENST00000339037 IGHV3OR16-10A0A075B7F0 116 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 EFCAB9A8MZ26 197 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 IFNL4K9M1U5 179 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 XKRYO14609 159 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 RPS2P15880 293 aaKnown RBP13.1□□□□□ -0.31
LINC01116-202ENST00000339037 CPT2P23786 658 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 ERFP50548 548 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 PRKCDQ05655 676 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 TRAM2Q15035 370 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 C1orf94Q6P1W5 598 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 CBLL1Q75N03 491 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 ATG16L2Q8NAA4 619 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 OR10AD1Q8NGE0 317 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
LINC01116-202ENST00000339037 UPRTQ96BW1 309 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 HSH2DQ96JZ2 352 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 SLITRK2Q9H156 845 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 GRHPRQ9UBQ7 328 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 ADAM18Q9Y3Q7 739 aa13.1□□□□□ -0.31
LINC01116-202ENST00000339037 WNK1Q9H4A3 2382 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 A0A087WUU8 490 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 GSTA4O15217 222 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 CCDC22O60826 627 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 GPANK1O95872 356 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 SERPINA1P01009 418 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 WNT2P09544 360 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 RAC2P15153 192 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 NCK1P16333 377 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 MDKP21741 143 aaPredicted RBP13.09□□□□□ -0.31
LINC01116-202ENST00000339037 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
LINC01116-202ENST00000339037 GPR4P46093 362 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 SLC9A3P48764 834 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 NUDT2P50583 147 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 GNB2P62879 340 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 PAX2Q02962 417 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 AQP6Q13520 282 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 IFI44LQ53G44 452 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 TBPL2Q6SJ96 375 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 SPATC1Q76KD6 591 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 TSEN54Q7Z6J9 526 aaKnown RBP13.09□□□□□ -0.31
LINC01116-202ENST00000339037 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 ACOT11Q8WXI4 607 aaPredicted RBP13.09□□□□□ -0.31
LINC01116-202ENST00000339037 SLC7A6Q92536 515 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 PTP4A1Q93096 173 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 HOPXQ9BPY8 73 aaPredicted RBP13.09□□□□□ -0.31
LINC01116-202ENST00000339037 MED4Q9NPJ6 270 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 ASH2LQ9UBL3 628 aa13.09□□□□□ -0.31
LINC01116-202ENST00000339037 IGHV2-70DA0A0C4DH43 119 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 TEX13CA0A0J9YWL9 993 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 PRSS37A4D1T9 235 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 OR6C6A6NF89 314 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 J3QW42 95 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 CDC42EP2O14613 210 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 AHCYL1O43865 530 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF205O95201 554 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 PLATP00750 562 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 CD14P08571 375 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 CTLA4P16410 223 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 HLXQ14774 488 aaPredicted RBP13.08□□□□□ -0.32
LINC01116-202ENST00000339037 MIDNQ504T8 468 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 MESTQ5EB52 335 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 C16orf87Q6PH81 154 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF730Q6ZMV8 503 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 MBOAT2Q6ZWT7 520 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF420Q8TAQ5 688 aaPredicted RBP13.08□□□□□ -0.32
LINC01116-202ENST00000339037 RAB40AQ8WXH6 277 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 TMIGD2Q96BF3 282 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 PLEKHA8Q96JA3 519 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 MEGF10Q96KG7 1140 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF570Q96NI8 536 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 EFCAB1Q9HAE3 211 aa13.08□□□□□ -0.32
LINC01116-202ENST00000339037 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
LINC01116-202ENST00000339037 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 CYB5R3P00387 301 aaPredicted RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF26P17031 533 aaPredicted RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 OMGP23515 440 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 RGS6P49758 472 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 OR2T2Q6IF00 324 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 FBXW12Q6X9E4 464 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 HACD2Q6Y1H2 254 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms