RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RAB40BQ12829 278 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 RSPO1Q2MKA7 263 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 KLHL22Q53GT1 634 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 C6orf141Q5SZD1 244 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 KRT80Q6KB66 452 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 KCTD18Q6PI47 426 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 LRRN1Q6UXK5 716 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR52I1Q8NGK6 324 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 CLEC4MQ9H2X3 399 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 EIF3KQ9UBQ5 218 aaKnown RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 GRIP1Q9Y3R0 1128 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 PCDHGB1Q9Y5G3 927 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 HEATR1Q9H583 2144 aaKnown RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 A0A1W2PPR1 153 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 DAPL1A0PJW8 107 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 PRR32B1ATL7 298 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 J3QRE1 110 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 PSMD9O00233 223 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 DENRO43583 198 aaKnown RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 FADS2O95864 444 aaKnown RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ABHD16AO95870 558 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 FAM157BP0CG42 384 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 NR4A1P22736 598 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 HSD11B1P28845 292 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 WNT5AP41221 380 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 SLC15A1P46059 708 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 TPTEP56180 551 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 GRB2P62993 217 aaKnown RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ACTC1P68032 377 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ACTA1P68133 377 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF85Q03923 595 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 KRTAP27-1Q3LI81 207 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF672Q499Z4 452 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ARL9Q6T311 187 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF322Q6U7Q0 402 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 SSX6Q7RTT6 188 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 KRT77Q7Z794 578 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 LILRB1Q8NHL6 650 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 AKAP1Q92667 903 aaKnown RBP eCLIP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 GGHQ92820 318 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 C4orf45Q96LM5 186 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 DCLRE1CQ96SD1 692 aaKnown RBP12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 KCNJ15Q99712 375 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 RHNO1Q9BSD3 238 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 PLCXD1Q9NUJ7 323 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 IKZF2Q9UKS7 526 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 MYRFQ9Y2G1 1151 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 PCDHGB5Q9Y5G0 923 aa12.17□□□□□ -0.46
APOBEC3B-202ENST00000335760 IRGMA1A4Y4 181 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 E7EQL1 145 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 M0R135 149 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 MAGEB4O15481 346 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 ACSM4P0C7M7 580 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 PCSK6P29122 969 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 PRKXP51817 358 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 UCP2P55851 309 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 EGR3Q06889 387 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 SNTB2Q13425 540 aaKnown RBP12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 VHLLQ6RSH7 139 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 RHOUQ7L0Q8 258 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 ACBD7Q8N6N7 88 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF799Q96GE5 643 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR8B4Q96RC9 309 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 MROQ9BYG7 248 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 FGF20Q9NP95 211 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 CISD1Q9NZ45 108 aaKnown RBP12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 LRP12Q9Y561 859 aa12.16□□□□□ -0.46
APOBEC3B-202ENST00000335760 EFCAB10A6NFE3 127 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 SLC1A7O00341 560 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 SMPD2O60906 423 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 NGFP01138 241 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 IGHA1P01876 353 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 LCKP06239 509 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 PRF1P14222 555 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 RAD52P43351 418 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 SLC6A9P48067 706 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 CX3CR1P49238 355 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 CSNK2BP67870 215 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 ROM1Q03395 351 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 DEGS2Q6QHC5 323 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 NAA40Q86UY6 237 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF679Q8IYX0 411 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF101Q8IZC7 436 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 NUP37Q8NFH4 326 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 ABHD4Q8TB40 342 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 SNX33Q8WV41 574 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 IPCEF1Q8WWN9 437 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 TMEM80Q96HE8 168 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 UBTD1Q9HAC8 227 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms