RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 ARR3P36575 388 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 GDI2P50395 445 aaKnown RBP15.81■□□□□ 0.12
SYNE4-201ENST00000324444 MMP16P51512 607 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 TUBA1BP68363 451 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 FOXB2Q5VYV0 432 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 ZNF787Q6DD87 383 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 ARL9Q6T311 187 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 BEND4Q6ZU67 534 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 TUBA1AQ71U36 451 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 LINGO2Q7L985 606 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 DOLPP1Q86YN1 238 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 LRRC18Q8N456 261 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 C1orf162Q8NEQ5 155 aaPredicted RBP15.81■□□□□ 0.12
SYNE4-201ENST00000324444 RPS4Y2Q8TD47 263 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 SPTSSAQ969W0 71 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 MAP6Q96JE9 813 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 TTTY10Q9BZA0 68 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 PIGMQ9H3S5 423 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 DDX28Q9NUL7 540 aaKnown RBP15.81■□□□□ 0.12
SYNE4-201ENST00000324444 GALNT8Q9NY28 637 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 SH3BGRL2Q9UJC5 107 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 LRP12Q9Y561 859 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 FAM215AQ9Y5M1 114 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 R4GMQ9 66 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 CELSR2Q9HCU4 2923 aa15.81■□□□□ 0.12
SYNE4-201ENST00000324444 PHF3Q92576 2039 aaKnown RBP15.8■□□□□ 0.12
SYNE4-201ENST00000324444 ITPR2Q14571 2701 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 RPP14O95059 124 aaKnown RBP15.8■□□□□ 0.12
SYNE4-201ENST00000324444 UBL3O95164 117 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 B4GALT1P15291 398 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 CA7P43166 264 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 P2RY6Q15077 328 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 RAB35Q15286 201 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 CTF1Q16619 201 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 YIF1BQ5BJH7 314 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 ELFN2Q5R3F8 820 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 RTL6Q6ICC9 239 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 OR7E24Q6IFN5 339 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 TMEM53Q6P2H8 277 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 MTFR2Q6P444 385 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 CD200R1LQ6Q8B3 271 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 CORO6Q6QEF8 472 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 SLC16A12Q6ZSM3 486 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 USP43Q70EL4 1123 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 ZNF837Q96EG3 531 aaPredicted RBP15.8■□□□□ 0.12
SYNE4-201ENST00000324444 BOD1Q96IK1 185 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 AMELYQ99218 206 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 KCNJ15Q99712 375 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 ATF6BQ99941 703 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 MOV10Q9HCE1 1003 aaKnown RBP15.8■□□□□ 0.12
SYNE4-201ENST00000324444 EXOSC4Q9NPD3 245 aaKnown RBP15.8■□□□□ 0.12
SYNE4-201ENST00000324444 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 PRSS50Q9UI38 385 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 ZNF281Q9Y2X9 895 aa15.8■□□□□ 0.12
SYNE4-201ENST00000324444 SF3B6Q9Y3B4 125 aaKnown RBP15.8■□□□□ 0.12
SYNE4-201ENST00000324444 LOC100506127A0A0U1RQW1 187 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 E9PI62 339 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 LOC110117498-PIK3R3F6TDL0 507 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 PSMD9O00233 223 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 SGCEO43556 437 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 GATBO75879 557 aaKnown RBP15.79■□□□□ 0.12
SYNE4-201ENST00000324444 RGS9O75916 674 aaPredicted RBP15.79■□□□□ 0.12
SYNE4-201ENST00000324444 UGT2B10P36537 528 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 SLC3A1Q07837 685 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 ZNF704Q6ZNC4 412 aaPredicted RBP15.79■□□□□ 0.12
SYNE4-201ENST00000324444 SEM1Q6ZVN7 128 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.79■□□□□ 0.12
SYNE4-201ENST00000324444 OR2G2Q8NGZ5 317 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 OR5AK2Q8NH90 309 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 GHSRQ92847 366 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 CHCHD6Q9BRQ6 235 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 RNF121Q9H920 327 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 ZNF629Q9UEG4 869 aaPredicted RBP15.79■□□□□ 0.12
SYNE4-201ENST00000324444 FBXL3Q9UKT7 428 aa15.79■□□□□ 0.12
SYNE4-201ENST00000324444 PNMA8CA0A1B0GUJ8 204 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 TMEM269A0A1B0GVZ9 245 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 E9PLN8 166 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 CCL21O00585 134 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 RER1O15258 196 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 MAGEB4O15481 346 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-201ENST00000324444 GLI4P10075 376 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 COX5BP10606 129 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 PSKH1P11801 424 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 MAPK3P27361 379 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-201ENST00000324444 HOXC12P31275 282 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 CRYBB2P43320 205 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 CNPY1Q3B7I2 92 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 CFAP77Q6ZQR2 320 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 ZNF676Q8N7Q3 588 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 ZFP41Q8N8Y5 198 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 OR1K1Q8NGR3 316 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 FBXO17Q96EF6 278 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 KCTD7Q96MP8 289 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 SH3GL3Q99963 347 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 USB1Q9BQ65 265 aaKnown RBP15.78■□□□□ 0.12
SYNE4-201ENST00000324444 VKORC1Q9BQB6 163 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 TMED9Q9BVK6 235 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 HDHD5Q9BXW7 423 aa15.78■□□□□ 0.12
SYNE4-201ENST00000324444 NAA50Q9GZZ1 169 aaKnown RBP15.78■□□□□ 0.12
SYNE4-201ENST00000324444 OR51E2Q9H255 320 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms