RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SLC19A3Q9BZV2 496 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 FANCFQ9NPI8 374 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 BIN3Q9NQY0 253 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 POLE3Q9NRF9 147 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 RAB19A4D1S5 217 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ELOA3DA6NLF2 546 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 RAD1O60671 282 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 F12P00748 615 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 HLA-AP01891 365 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 CAPZA1P52907 286 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 SLC37A1P57057 533 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF528Q3MIS6 628 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ELOA3BQ3SY89 546 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF550Q7Z398 422 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 PRSS35Q8N3Z0 413 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 C10orf53Q8N6V4 93 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ELOA3Q8NG57 546 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 C2CD4CQ8TF44 421 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 SLC25A21Q9BQT8 299 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 Q9N2J8 555 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 FARSAQ9Y285 508 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 PLEKHA6Q9Y2H5 1048 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 A0A087WUJ7 227 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 LOC100289279A0A1B0GTE1 492 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 OR2AT4A6NND4 320 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 FAM25EA8MYX2 175 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 GMFGO60234 142 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 FADS1O60427 444 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 MELTFP08582 738 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 SLC25A4P12235 298 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 CCKBRP32239 447 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 RORAP35398 523 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 CASRP41180 1078 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 MEOX2P50222 304 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 BLOC1S1P78537 153 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 LCN10Q6JVE6 187 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 DPY19L4Q7Z388 723 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 CDC20BQ86Y33 519 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ARMC10Q8N2F6 343 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 SEH1LQ96EE3 360 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 NXF5Q9H1B4 397 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ARRDC1-AS1Q9H2J1 176 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 LHX6Q9UPM6 363 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 IGKV3D-11A0A0A0MRZ8 115 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 TMEM212A6NML5 194 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 C17orf51A8MQB3 221 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 PRSS44E7EML9 344 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 KCNAB3O43448 404 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF432O94892 652 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 NAT2P11245 290 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 HOXB1P14653 301 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 RFC3P40938 356 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 PRPS1P60891 318 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 MED25Q71SY5 747 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 COX15Q7KZN9 410 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 SPAG16Q8N0X2 631 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 CARFQ8N187 725 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 PLPP7Q8NBV4 271 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 NUDT9Q9BW91 350 aa15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ZMAT3Q9HA38 289 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-201ENST00000316097 ACTL6AO96019 429 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 RPS4XP62701 263 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 ISXQ2M1V0 245 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 OTPQ5XKR4 325 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 LRRC69Q6ZNQ3 347 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 KMT5CQ86Y97 462 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 TMEM229BQ8NBD8 167 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 THAP6Q8TBB0 222 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 PAQR8Q8TEZ7 354 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 MCHR2Q969V1 340 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 ZBTB8AQ96BR9 441 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 MVB12AQ96EY5 273 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 CMSS1Q9BQ75 279 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 ZNF629Q9UEG4 869 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 CELSR3Q9NYQ7 3312 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 BLACEA4D250 179 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 OR6C76A6NM76 312 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 SULT2B1O00204 365 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 SCRG1O75711 98 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 AKR7A3O95154 331 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 DDAH2O95865 285 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 GPANK1O95872 356 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 APOC1P02654 83 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 F13BP05160 661 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 PNLIPP16233 465 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 ZNF28P17035 718 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 CTXN1P60606 82 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 S100A12P80511 92 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 SRSF3P84103 164 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 SSBP1Q04837 148 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 PEAR1Q5VY43 1037 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 H3F3CQ6NXT2 135 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 LPCAT3Q6P1A2 487 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 C16orf47Q6ZP98 133 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 BPIFB2Q8N4F0 458 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 EXD3Q8N9H8 876 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 OR1M1Q8NGA1 313 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 ZNF721Q8TF20 911 aa15.39■□□□□ 0.05
SCAMP4-201ENST00000316097 WDR76Q9H967 626 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms