RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 DYNLRB1Q9NP97 96 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ERICH4A6NGS2 130 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ZSCAN5BA6NJL1 495 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 RIIAD1A6NNX1 92 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 WNT9BO14905 357 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 CDC14BO60729 498 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 SELEP16581 610 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 GRK5P34947 590 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 PRKXP51817 358 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ARHGDIAP52565 204 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 SCRN3Q0VDG4 424 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 PSG7Q13046 419 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ELFN2Q5R3F8 820 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 DNM1P34Q6PK57 102 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 TCEANCQ8N8B7 351 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 OR10H5Q8NGA6 315 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 OR6N2Q8NGY6 317 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 SYNPRQ8TBG9 265 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 CENPNQ96H22 339 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-201ENST00000311943 SNX18Q96RF0 628 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 OSBPL10Q9BXB5 764 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 RIBC2Q9H4K1 309 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 PPP1R3EQ9H7J1 279 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 S100A14Q9HCY8 104 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 CENPMQ9NSP4 180 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 PTTG3PQ9NZH4 202 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 FBXL3Q9UKT7 428 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 IGLV3-9A0A075B6K5 115 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 A0A096LNT2 108 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SPRY3O43610 288 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF250P15622 560 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF3P17036 446 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 IGFBP5P24593 272 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 PCBD1P61457 104 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 TRIP10Q15642 601 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SNAPC1Q16533 368 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 TSTQ16762 297 aaKnown RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 LRRC36Q1X8D7 754 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 Q6ZR03 302 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF771Q7L3S4 317 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SHFQ7M4L6 423 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SYT9Q86SS6 491 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 HIPK1Q86Z02 1210 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 TIGD4Q8IY51 512 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 CBR4Q8N4T8 237 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 BHLHE23Q8NDY6 225 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 OR2AE1Q8NHA4 323 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ST7LQ8TDW4 575 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 YIPF5Q969M3 257 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 NRBF2Q96F24 287 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SOX7Q9BT81 388 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 DNAJC27Q9NZQ0 273 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF319Q9P2F9 582 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 KLHL21Q9UJP4 597 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 PMF1-BGLAPU3KQ54 211 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SETD2Q9BYW2 2564 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 LRP5LA4QPB2 252 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 CCDC182A6NF36 153 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ZAR1LA6NP61 321 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 PRR23D1E9PI22 279 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 M0R233 179 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 TLX2O43763 284 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 LY6G6DO95868 133 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 INHBBP09529 407 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 PRR23D2P0DMB1 279 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SLC2A5P22732 501 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 RAD52P43351 418 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 MMP15P51511 669 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 EFNA4P52798 201 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SLC25A1P53007 311 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 EFNB1P98172 346 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 APOFQ13790 326 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 CXXC5Q7LFL8 322 aaKnown RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 GJC3Q8NFK1 279 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 POP5Q969H6 163 aaKnown RBP10.28□□□□□ -0.76
SCFD1-201ENST00000311943 CMBLQ96DG6 245 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 C18orf12Q96KH6 178 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 GABARAPL1Q9H0R8 117 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 NARFLQ9H6Q4 476 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 SLC25A19Q9HC21 320 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
SCFD1-201ENST00000311943 NF1P21359 2839 aa10.27□□□□□ -0.76
SCFD1-201ENST00000311943 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 H0YL77 283 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 BAG2O95816 211 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF823P16415 610 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 FMO3P31513 532 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 IL2RGP31785 369 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 KLF3P57682 345 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-201ENST00000311943 RPS7P62081 194 aaKnown RBP10.27□□□□□ -0.77
SCFD1-201ENST00000311943 NKPD1Q17RQ9 610 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 C1QTNF12Q5T7M4 302 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 OR2T2Q6IF00 324 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 DPPA2Q7Z7J5 298 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 OR2AJ1Q8NGZ0 328 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 DVL3Q92997 716 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-201ENST00000311943 PPP1R14AQ96A00 147 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms