RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TIMM8AO60220 97 aaPredicted RBP17.02■□□□□ 0.32
VEGFB-201ENST00000309422 BAG2O95816 211 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 CLUP10909 449 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 HSD11B1P28845 292 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 GGT2P36268 569 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 ALDH3B1P43353 468 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 ERVS71-1P61550 626 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 PCGF3Q3KNV8 242 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 ZNF362Q5T0B9 420 aaPredicted RBP17.02■□□□□ 0.32
VEGFB-201ENST00000309422 MBNL2Q5VZF2 373 aaKnown RBP17.02■□□□□ 0.32
VEGFB-201ENST00000309422 TMEM236Q5W0B7 351 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 CFAP77Q6ZQR2 320 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 DCXRQ7Z4W1 244 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 C18orf12Q96KH6 178 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 TPK1Q9H3S4 243 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 MED20Q9H944 212 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 HINT3Q9NQE9 182 aaKnown RBP17.02■□□□□ 0.32
VEGFB-201ENST00000309422 CENPMQ9NSP4 180 aa17.02■□□□□ 0.32
VEGFB-201ENST00000309422 ZNF878C9JN71 531 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 H7C1Q1 480 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 NDUFS8O00217 210 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 NDUFS7O75251 213 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 APOC1P02654 83 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 CDC42P60953 191 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 HIST1H3AP68431 136 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 EIF2B1Q14232 305 aaKnown RBP17.02■□□□□ 0.31
VEGFB-201ENST00000309422 HIST2H3PS2Q5TEC6 136 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 HIST2H3AQ71DI3 136 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 KRTAP1-3Q8IUG1 177 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 CPOQ8IVL8 374 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 ZNF511Q8NB15 262 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 ZNF540Q8NDQ6 660 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 KLF14Q8TD94 323 aaPredicted RBP17.02■□□□□ 0.31
VEGFB-201ENST00000309422 SP140LQ9H930 580 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 WDR76Q9H967 626 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 IMPAD1Q9NX62 359 aa17.02■□□□□ 0.31
VEGFB-201ENST00000309422 HEATR1Q9H583 2144 aaKnown RBP17.01■□□□□ 0.31
VEGFB-201ENST00000309422 IGLV3-9A0A075B6K5 115 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 TRIM64A6NGJ6 449 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 TRIM64BA6NI03 449 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 M0R135 149 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 MITFO75030 526 aaPredicted RBP17.01■□□□□ 0.31
VEGFB-201ENST00000309422 IGHV3-13P01766 116 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 SLC25A16P16260 332 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 GRB2P62993 217 aaKnown RBP17.01■□□□□ 0.31
VEGFB-201ENST00000309422 PPP2R2BQ00005 443 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 MAD2L1BPQ15013 274 aaPredicted RBP17.01■□□□□ 0.31
VEGFB-201ENST00000309422 ALKBH6Q3KRA9 238 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 TEX30Q5JUR7 227 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 LRP11Q86VZ4 500 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 GID4Q8IVV7 300 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 ZNF525Q8N782 197 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 ZNF454Q8N9F8 522 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 SLC7A6Q92536 515 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 EME1Q96AY2 570 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 ZMYND19Q96E35 227 aaPredicted RBP17.01■□□□□ 0.31
VEGFB-201ENST00000309422 ZNF799Q96GE5 643 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 TMUB1Q9BVT8 246 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 HCAR1Q9BXC0 346 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 GABARAPL3Q9BY60 117 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 TOR3AQ9H497 397 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 DECR2Q9NUI1 292 aa17.01■□□□□ 0.31
VEGFB-201ENST00000309422 LOC390937A0A1W2PQ73 354 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 SLC22A31A6NKX4 558 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 H3BNX3 289 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 EI24O14681 340 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 SMAD7O15105 426 aaKnown RBP17■□□□□ 0.31
VEGFB-201ENST00000309422 LCATP04180 440 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 DBHP09172 617 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 NAT2P11245 290 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 DAOP14920 347 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 TNFSF4P23510 183 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 RPS27P42677 84 aaKnown RBP17■□□□□ 0.31
VEGFB-201ENST00000309422 ZNF81P51508 661 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 ALDH3A2P51648 485 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 APOFQ13790 326 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 FAM209AQ5JX71 171 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 SLX4IPQ5VYV7 408 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 LURAP1LQ8IV03 231 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 SLAMF6Q96DU3 332 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 MARS2Q96GW9 593 aaKnown RBP17■□□□□ 0.31
VEGFB-201ENST00000309422 EGLN1Q9GZT9 426 aa17■□□□□ 0.31
VEGFB-201ENST00000309422 DDX28Q9NUL7 540 aaKnown RBP17■□□□□ 0.31
VEGFB-201ENST00000309422 TMEM129A0AVI4 362 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 ZAR1LA6NP61 321 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 C17orf100A8MU93 164 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 CLPTM1O96005 669 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 NGFP01138 241 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 INHBBP09529 407 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 SELEP16581 610 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 DBPQ10586 325 aaPredicted RBP16.99■□□□□ 0.31
VEGFB-201ENST00000309422 TNK1Q13470 666 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 LYPD4Q6UWN0 246 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 DRAM2Q6UX65 266 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 DPY19L4Q7Z388 723 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 BIVMQ86UB2 503 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.99■□□□□ 0.31
VEGFB-201ENST00000309422 MAP6Q96JE9 813 aa16.99■□□□□ 0.31
VEGFB-201ENST00000309422 DIRC2Q96SL1 478 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms