RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 M0R082 166 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 CCL2P13500 99 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 TCN2P20062 427 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 CD38P28907 300 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 DHODHQ02127 395 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 KIR2DS3Q14952 304 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 BTNL8Q6UX41 500 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 TUSC5Q8IXB3 177 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 KLHDC8BQ8IXV7 354 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 OR13H1Q8NG92 308 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 ASB13Q8WXK3 278 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 RAB39BQ96DA2 213 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 SOX7Q9BT81 388 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 M0QZQ0 153 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 MTNR1BP49286 362 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 HNRNPA1L2Q32P51 320 aaKnown RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 SYT14P1Q58G82 188 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 VWA1Q6PCB0 445 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 OR10AD1Q8NGE0 317 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 UBL7Q96S82 380 aaPredicted RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 A0A1W2PPH5 198 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 RGS11O94810 467 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 MAP2K6P52564 334 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 RAB35Q15286 201 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 OR5M9Q8NGP3 310 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 ACOT8O14734 319 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 ATP1B1P05026 303 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 THBS3P49746 956 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 GPM6AP51674 278 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 LGALS4P56470 323 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 RAB38P57729 211 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 RNASEKQ6P5S7 137 aaKnown RBP11.52□□□□□ -0.56
USP38-201ENST00000307017 MFSD4AQ8N468 514 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 HLA-CQ95604 372 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 WDR89Q96FK6 387 aaPredicted RBP11.52□□□□□ -0.56
USP38-201ENST00000307017 UTP23Q9BRU9 249 aaKnown RBP11.52□□□□□ -0.56
USP38-201ENST00000307017 UBQLN3Q9H347 655 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 NINQ8N4C6 2090 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 ADAM10O14672 748 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 ARPC3O15145 178 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 ZNF217O75362 1048 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 ZNF205O95201 554 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 PRDX1Q06830 199 aaKnown RBP11.52□□□□□ -0.56
USP38-201ENST00000307017 CMPK2Q5EBM0 449 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 NANOGP1Q8N7R0 232 aa11.52□□□□□ -0.56
USP38-201ENST00000307017 RNF212BA8MTL3 300 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 ABCD4O14678 606 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 TIMP1P01033 207 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 CRYBA1P05813 215 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 ZNF787Q6DD87 383 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 GDPGP1Q6ZNW5 385 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 PRSS16Q9NQE7 514 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 LAMP3Q9UQV4 416 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 LOC107986453A0A1B0GWG9 222 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 ZNF587BE7ETH6 402 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 PDGFBP01127 241 aaPredicted RBP11.52□□□□□ -0.57
USP38-201ENST00000307017 PLAURQ03405 335 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 OR5AP2Q8NGF4 316 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 TRAV36DV7A0A075B6V5 113 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 DRGXA6NNA5 263 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 MBP02144 154 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 MYBPHQ13203 477 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 SLC51BQ86UW2 128 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.57
USP38-201ENST00000307017 IL22RA2Q969J5 263 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 SLC35A4Q96G79 324 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 MAF1Q9H063 256 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 IKZF5Q9H5V7 419 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 ARNTLO00327 626 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 HMGN4O00479 90 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 GATCO43716 136 aaKnown RBP11.52□□□□□ -0.57
USP38-201ENST00000307017 GLCEO94923 617 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 NID1P14543 1247 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 CD46P15529 392 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 CD1EP15812 388 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 HTR3AP46098 478 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 MANEAQ5SRI9 462 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 RGP1Q92546 391 aaPredicted RBP11.52□□□□□ -0.57
USP38-201ENST00000307017 TECTBQ96PL2 329 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 SLC22A7Q9Y694 548 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 POMT1Q9Y6A1 747 aa11.52□□□□□ -0.57
USP38-201ENST00000307017 SLC16A6O15403 523 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 DNAJB6O75190 326 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 AVPR2P30518 371 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 LIPNQ5VXI9 398 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 TGIF2LYQ8IUE0 185 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 SFTA3P0C7M3 94 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 DCAF12Q5T6F0 453 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 MYEOVQ96EZ4 313 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 DIMT1Q9UNQ2 313 aaKnown RBP11.51□□□□□ -0.57
USP38-201ENST00000307017 FAM96BQ9Y3D0 163 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 UBL3O95164 117 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms