RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 BPIFB2Q8N4F0 458 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 CHST8Q9H2A9 424 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 IKZF5Q9H5V7 419 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 C12orf10Q9HB07 376 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 FBP1P09467 338 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 GPX2P18283 190 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 TGM1P22735 817 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 PIGAP37287 484 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 PPP1CAP62136 330 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 IER5LQ5T953 404 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 STPG1Q5TH74 334 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 C17orf107Q6ZR85 190 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 DEFB124Q8NES8 71 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 OR2T6Q8NHC8 308 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 RAB33BQ9H082 229 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 TUBB1Q9H4B7 451 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 TMEM30AQ9NV96 361 aa7.6□□□□□ -1.19
PCDHB1-201ENST00000306549 OR2M5A3KFT3 312 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ZNF593O00488 134 aaPredicted RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 GPR85P60893 370 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SNRPD2P62316 118 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 NXNL2Q5VZ03 156 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PLAG1Q6DJT9 500 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 CNIH2Q6PI25 160 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 Q6ZS52 159 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 Q6ZTK2 550 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 RFPL4BQ6ZWI9 263 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TMEM130Q8N3G9 435 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 DTWD1Q8N5C7 304 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 OR2AE1Q8NHA4 323 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 CHRDL1Q9BU40 450 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 CXCL16Q9H2A7 254 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 MRPS28Q9Y2Q9 187 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PLXNA4Q9HCM2 1894 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 LRRC3CA6NJW4 275 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SLC31A2O15432 143 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TAPBPO15533 448 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 DOK2O60496 412 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TACR1P25103 407 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 BLVRBP30043 206 aaPredicted RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 HNRNPFP52597 415 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TFF2Q03403 129 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ZNF836Q6ZNA1 936 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 OR10AD1Q8NGE0 317 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 OR2Y1Q8NGV0 311 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PAQR8Q8TEZ7 354 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ASB5Q8WWX0 329 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TMEM230Q96A57 120 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 CSF3RQ99062 836 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PLA2G2FQ9BZM2 168 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 WWTR1Q9GZV5 400 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SLCO5A1Q9H2Y9 848 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 J3QR89 54 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SGCEO43556 437 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ZNF766Q5HY98 468 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SLC23A3Q6PIS1 610 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 CCBE1Q6UXH8 406 aaPredicted RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 WDR76Q9H967 626 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ARPC3O15145 178 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TBX19O60806 448 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ATP1B1P05026 303 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 DRD3P35462 400 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 GPR12P47775 334 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 HLCSP50747 726 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PRAMEF5Q5TYX0 476 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 C1orf140Q5VVS0 124 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PRAMEF6Q5VXH4 476 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 FAM58AQ8N1B3 248 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SLC30A7Q8NEW0 376 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 BCO1Q9HAY6 547 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 BCL2L10Q9HD36 194 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 VAPAQ9P0L0 249 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 TRAV27A0A087WT01 109 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PRR33A8MZF0 331 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 H0Y8G0 127 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 I6L893 689 aaPredicted RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ARPC1BO15143 372 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PSMB10P40306 273 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ABHD4Q8TB40 342 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 THAP7Q9BT49 309 aaPredicted RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SOX7Q9BT81 388 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 ESRP2Q9H6T0 727 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 M0R1B8 84 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 MYF6P23409 242 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SRP9P49458 86 aaKnown RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 PGGHGQ32M88 737 aa7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 SMAP2Q8WU79 429 aaPredicted RBP7.59□□□□□ -1.19
PCDHB1-201ENST00000306549 C2orf16Q68DN1 1984 aa7.59□□□□□ -1.2
PCDHB1-201ENST00000306549 CYTIPO60759 359 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 HPGDSO60760 199 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 UBE2IP63279 158 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 CEACAM7Q14002 265 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 MRGPRX3Q96LB0 322 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ATP5SQ99766 215 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ALG12Q9BV10 488 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 SEMA4GQ9NTN9 838 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 R4GN57 208 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 NOTCH4Q99466 2003 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ACTL6AO96019 429 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms