RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MAGT1Q9H0U3 335 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CD300AQ9UGN4 299 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ADAM29Q9UKF5 820 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 IGLV3-10A0A075B6K4 115 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 OR10A3P58181 314 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 FMODQ06828 376 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 DOC2BQ14184 412 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 LIPNQ5VXI9 398 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ACSM5Q6NUN0 579 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 RPL22L1Q6P5R6 122 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TMEM81Q6P7N7 255 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 FAM198BQ6UWH4 519 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF793Q6ZN11 406 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 RETREG3Q86VR2 466 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 FAM103A1Q9BTL3 118 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 FN3KRPQ9HA64 309 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 FBXO34Q9NWN3 711 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MKS1Q9NXB0 559 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 SRMP19623 302 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 HTR4Q13639 388 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ACOT7LQ6ZUV0 252 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TRUB1Q8WWH5 349 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GABRG3Q99928 467 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ARV1Q9H2C2 271 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ISG20L2Q9H9L3 353 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 LYRM4Q9HD34 91 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 A4GALTQ9NPC4 353 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 A0A1W2PS29 197 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TMEM82A0PJX8 343 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 RNF212BA8MTL3 300 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CBR3O75828 277 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GDNFP39905 211 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MRPL19P49406 292 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 PCBP4P57723 403 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GRB2P62993 217 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 SPATS1Q496A3 300 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 VN1R1Q9GZP7 353 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 PATZ1Q9HBE1 687 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TXNL4BQ9NX01 149 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MOKQ9UQ07 419 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 NUBP2Q9Y5Y2 271 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 UBR2Q8IWV8 1755 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GGTLC2Q14390 218 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ACER2Q5QJU3 275 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 FAM3DQ96BQ1 224 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OR52A5Q9H2C5 316 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 NKX2-8O15522 239 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OR2T7P0C7T2 308 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CHRNB1P11230 501 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 FAHP16930 419 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CTRB1P17538 263 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ARNTP27540 789 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 RPS23P62266 143 aaKnown RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CTRB2Q6GPI1 263 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 BTNL3Q6UXE8 466 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 RND1Q92730 232 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OXGR1Q96P68 337 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 C1orf123Q9NWV4 160 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 PCOLCE2Q9UKZ9 415 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 T-ENOLP0DO92 83 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 TAS2R31P59538 309 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 FLI1Q01543 452 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 METTL11BQ5VVY1 283 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ZDHHC23Q8IYP9 409 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 PARP16Q8N5Y8 322 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OR2A1Q8NGT9 310 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ARL11Q969Q4 196 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 PCGF1Q9BSM1 259 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OR51J1Q9H342 316 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 FAM60AQ9NP50 221 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 URGCP-MRPS24S4R325 110 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ALG1L2C9J202 215 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 SSSCA1O60232 199 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 RAC1P63000 192 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 THEM4Q5T1C6 240 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 STPG1Q5TH74 334 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 TMEM65Q6PI78 240 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 RNF113BQ8IZP6 322 aaKnown RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF583Q96ND8 569 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 BCL7BQ9BQE9 202 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 METTL17Q9H7H0 456 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 NRIP3Q9NQ35 241 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF230Q9UIE0 474 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 TUBAL3A6NHL2 446 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CDC34P49427 236 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 AVPI1Q5T686 147 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OTUD1Q5VV17 481 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CYS1Q717R9 158 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 MAVSQ7Z434 540 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ANKRD13BQ86YJ7 626 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CNTN4Q8IWV2 1026 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 LRRC56Q8IYG6 542 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 DNAJC22Q8N4W6 341 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 MBOAT4Q96T53 435 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 FOXB1Q99853 325 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 SLC26A1Q9H2B4 701 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 PCYT1BQ9Y5K3 369 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 CCDC88AQ3V6T2 1871 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 LOC107986453A0A1B0GWG9 222 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 H0YIG0 161 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms