RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LBX1P52954 281 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR2F1Q13607 317 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR2T2Q6IF00 324 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SLC35B4Q969S0 331 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR2A14Q96R47 310 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 CTSFQ9UBX1 484 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 MT-ATP6P00846 226 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR5AL1P0C617 328 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 NME1P15531 152 aaKnown RBP9.5□□□□□ -0.89
CLIP1-201ENST00000302528 MRPS21P82921 87 aaKnown RBP9.5□□□□□ -0.89
CLIP1-201ENST00000302528 GDF7Q7Z4P5 450 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR52I1Q8NGK6 324 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SLC25A43Q8WUT9 341 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-201ENST00000302528 C3orf30Q96M34 536 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TAAR6Q96RI8 345 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 GABARAPL1Q9H0R8 117 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 LAMP3Q9UQV4 416 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SOD1P00441 154 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TIMP1P01033 207 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SPRED3Q2MJR0 410 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 YOD1Q5VVQ6 348 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-201ENST00000302528 CHAC2Q8WUX2 184 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ACY3Q96HD9 319 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TECTBQ96PL2 329 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 CSF3RQ99062 836 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 DDOQ99489 341 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TXLNGYQ9BZA5 131 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TAS2R4Q9NYW5 299 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 NPTNQ9Y639 398 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ACOT8O14734 319 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ALOX12BO75342 701 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ALPLP05186 524 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TBXA2RP21731 343 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TPBGQ13641 420 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 IHHQ14623 411 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF528Q3MIS6 628 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 PCYT2Q99447 389 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SORT1Q99523 831 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 DEFB127Q9H1M4 99 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TIMM10BQ9Y5J6 103 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SOX18P35713 384 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 GPM6AP51674 278 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 CYHR1Q6ZMK1 362 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 OPALINQ96PE5 141 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 SNX11Q9Y5W9 270 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 RPL12P30050 165 aaKnown RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 BAK1Q16611 211 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 RNASEKQ6P5S7 137 aaKnown RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 LSRQ86X29 649 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 OR2L13Q8N349 312 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 LMO3Q8TAP4 145 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 GAL3ST2Q9H3Q3 398 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 SIT1Q9Y3P8 196 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 TRDV1A0A1B0GX56 115 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 ANKRD61A6NGH8 418 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 E5RGE8 158 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 H3BNC9 293 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 CYR61O00622 381 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 PPP6CO00743 305 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 NRG2O14511 850 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 TTRP02766 147 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 GIPP09681 153 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 CLEC2LP0C7M8 214 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 RPL27P61353 136 aaKnown RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 PRTGQ2VWP7 1150 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 ANKRD16Q6P6B7 361 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 LHFPL2Q6ZUX7 228 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 OR5AP2Q8NGF4 316 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 KLF16Q9BXK1 252 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 IL5P05113 134 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 SLC35E2P0CK97 266 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 FGF7P21781 194 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 ARR3P36575 388 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 JAG1P78504 1218 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 Q56UQ5 140 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 HTR3DQ70Z44 454 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 CAMKMTQ7Z624 323 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF573Q86YE8 665 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 OR52N1Q8NH53 320 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 OR51E1Q8TCB6 317 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 GATA6Q92908 595 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 MED30Q96HR3 178 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 GDF2Q9UK05 429 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-201ENST00000302528 NTNG1Q9Y2I2 539 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 NSG2Q9Y328 171 aa9.49□□□□□ -0.89
CLIP1-201ENST00000302528 ACOT7LQ6ZUV0 252 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 OLIG1Q8TAK6 271 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 CICQ96RK0 1608 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 LOC107986453A0A1B0GWG9 222 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 RBP4P02753 201 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 CD200P41217 278 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms